RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 IGKV1D-42A0A075B6H8 117 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 MS4A18H0YCH9 400 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 CBLP22681 906 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 PPOXP50336 477 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 IDH3GP51553 393 aaPredicted RBP18.27■□□□□ 0.52
NEDD8-201ENST00000250495 HGFACQ04756 655 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 OR1Q1Q15612 314 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 MS4A18Q3C1V0 323 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 C10orf111Q8N326 155 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 ANKS4BQ8N8V4 417 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 ANKRD27Q96NW4 1050 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 ASPNQ9BXN1 380 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 SLCO1B3Q9NPD5 702 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 KLHL14Q9P2G3 628 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 USP22Q9UPT9 525 aa18.27■□□□□ 0.52
NEDD8-201ENST00000250495 MXRA5Q9NR99 2828 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 MALRD1Q5VYJ5 2156 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 TRBV5-3A0A0A0MS03 114 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 ZNF99A8MXY4 864 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 TRAF3IP2O43734 574 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 ERCC1P07992 297 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 CELA3BP08861 270 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 ZNF16P17020 682 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 NPR2P20594 1047 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 CAPZA2P47755 286 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 ATP4BP51164 291 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 AQP5P55064 265 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 IQCCQ4KMZ1 466 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 AGKQ53H12 422 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 COMTD1Q86VU5 262 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 TMEM123Q8N131 208 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 SCAIQ8N9R8 606 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 HIPK4Q8NE63 616 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 ZNF837Q96EG3 531 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 SLC41A3Q96GZ6 507 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 LRR1Q96L50 414 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 SEC61A2Q9H9S3 476 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 B3GAT2Q9NPZ5 323 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.26■□□□□ 0.51
NEDD8-201ENST00000250495 KCNS2Q9ULS6 477 aa18.26■□□□□ 0.51
NEDD8-201ENST00000250495 A0A0B4J2E0 115 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 A0A1B0GX12 115 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 M0R3G1 203 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 APEHP13798 732 aaKnown RBP18.25■□□□□ 0.51
NEDD8-201ENST00000250495 THBS4P35443 961 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 NPRL3Q12980 569 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 FAM166AQ6J272 317 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 MDP1Q86V88 176 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 RANBP3LQ86VV4 465 aaPredicted RBP18.25■□□□□ 0.51
NEDD8-201ENST00000250495 SNX32Q86XE0 403 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 ARMC8Q8IUR7 673 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 C20orf196Q8IYI0 205 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 NEU4Q8WWR8 484 aaPredicted RBP18.25■□□□□ 0.51
NEDD8-201ENST00000250495 DOK1Q99704 481 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 RABEP2Q9H5N1 569 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 NOX1Q9Y5S8 564 aa18.25■□□□□ 0.51
NEDD8-201ENST00000250495 IGHV2OR16-5A0A0B4J2B6 119 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 LOC100289279A0A1B0GTE1 492 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 ZNF726A6NNF4 738 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 hCG_2039718K7EN88 272 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 BGLAPP02818 100 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 MDH1P40925 334 aaKnown RBP18.24■□□□□ 0.51
NEDD8-201ENST00000250495 PMS2P3Q13401 168 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 SQLEQ14534 574 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 ADRM1Q16186 407 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 SWT1Q5T5J6 900 aaKnown RBP18.24■□□□□ 0.51
NEDD8-201ENST00000250495 CARD17Q5XLA6 110 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 SPATA21Q7Z572 469 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 PHC2Q8IXK0 858 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 DYDC1Q8WWB3 177 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 TMEM43Q9BTV4 400 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 EMC6Q9BV81 110 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 IKZF5Q9H5V7 419 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 MRPL39Q9NYK5 338 aaKnown RBP18.24■□□□□ 0.51
NEDD8-201ENST00000250495 ANGPT4Q9Y264 503 aa18.24■□□□□ 0.51
NEDD8-201ENST00000250495 SLC35F4A4IF30 521 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 PHF1O43189 567 aaPredicted RBP18.23■□□□□ 0.51
NEDD8-201ENST00000250495 TPST2O60704 377 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 MFN2O95140 757 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 HPRP00739 348 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 HLA-DOBP13765 273 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 AQP1P29972 269 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 THBS2P35442 1172 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 CDH12P55289 794 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 GNGT1P63211 74 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 POU3F1Q03052 451 aaPredicted RBP18.23■□□□□ 0.51
NEDD8-201ENST00000250495 PUDPQ08623 228 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 DAG1Q14118 895 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 RUNDC3AQ59EK9 446 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 PHYHD1Q5SRE7 291 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 DLEU7Q6UYE1 221 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 PXKQ7Z7A4 578 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 MYPOPQ86VE0 399 aaPredicted RBP18.23■□□□□ 0.51
NEDD8-201ENST00000250495 C10orf53Q8N6V4 93 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 MSI2Q96DH6 328 aaKnown RBP18.23■□□□□ 0.51
NEDD8-201ENST00000250495 B3GNT2Q9NY97 397 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 POFUT2Q9Y2G5 429 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 CUBNO60494 3623 aa18.23■□□□□ 0.51
NEDD8-201ENST00000250495 IGHV4-61A0A0C4DH41 118 aa18.22■□□□□ 0.51
NEDD8-201ENST00000250495 ZNF503-AS2A6NEH8 195 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms