RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 LRRC75A-AS1Q8N1F1 130 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 GPR137CQ8N3F9 429 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 CCDC197Q8NCU1 140 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 OR52N5Q8NH56 324 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 LIPHQ8WWY8 451 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 IGFBPL1Q8WX77 278 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 FBXW5Q969U6 566 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 LRR1Q96L50 414 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ADAD1Q96M93 576 aaKnown RBP11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ANKRD19PQ9H560 264 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 ARL8BQ9NVJ2 186 aa11.2□□□□□ -0.62
VPREB3-201ENST00000248948 HEATR1Q9H583 2144 aaKnown RBP11.2□□□□□ -0.62
VPREB3-201ENST00000248948 DPRXA6NFQ7 191 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 ABCD4O14678 606 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 CLOCKO15516 846 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 GMNNO75496 209 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 OR7A10O76100 309 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 PRSS23O95084 383 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HIST1H2ABP04908 130 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 UMPSP11172 480 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HLA-DOBP13765 273 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HOXB1P14653 301 aaPredicted RBP11.19□□□□□ -0.62
VPREB3-201ENST00000248948 NCK1P16333 377 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 AHCYP23526 432 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 PRPS1P60891 318 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 SLC25A3Q00325 362 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 LGALS3BPQ08380 585 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 TRAM2Q15035 370 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF672Q499Z4 452 aaPredicted RBP11.19□□□□□ -0.62
VPREB3-201ENST00000248948 ANKRD16Q6P6B7 361 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 NHLRC1Q6VVB1 395 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 FKBP9P1Q75LS8 142 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HIST3H2AQ7L7L0 130 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HDDC2Q7Z4H3 204 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 CYP4Z1Q86W10 505 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 C20orf196Q8IYI0 205 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 WDR31Q8NA23 367 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 KBTBD8Q8NFY9 601 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 PFN4Q8NHR9 129 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 AKAP1Q92667 903 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPREB3-201ENST00000248948 HIST1H2ACQ93077 130 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 SGTBQ96EQ0 304 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 NELFAQ9H3P2 528 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 B3GAT2Q9NPZ5 323 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 MAN2C1Q9NTJ4 1040 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 MED29Q9NX70 200 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 TAS2R5Q9NYW4 299 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 EGFL7Q9UHF1 273 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
VPREB3-201ENST00000248948 SLC35F4A4IF30 521 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF99A8MXY4 864 aaPredicted RBP11.18□□□□□ -0.62
VPREB3-201ENST00000248948 PLAUP00749 431 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 TSPAN19P0C672 248 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 PAX1P15863 534 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 CD40P25942 277 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 UBE2NP61088 152 aaKnown RBP11.18□□□□□ -0.62
VPREB3-201ENST00000248948 MXRA7P84157 204 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 C3orf36Q3SXR2 165 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 HIKESHIQ53FT3 197 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 GLYATQ6IB77 296 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 FITM2Q8N6M3 262 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 LRRC17Q8N6Y2 441 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 OR6X1Q8NH79 312 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 FNDC11Q9BVV2 318 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 ULBP2Q9BZM5 246 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 CXorf56Q9H5V9 222 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 GPR35Q9HC97 309 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 C20orf141Q9NUB4 165 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 DCAF13Q9NV06 445 aaKnown RBP11.18□□□□□ -0.62
VPREB3-201ENST00000248948 STX18Q9P2W9 335 aaKnown RBP11.18□□□□□ -0.62
VPREB3-201ENST00000248948 HIF3AQ9Y2N7 669 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 ARID1AO14497 2285 aa11.18□□□□□ -0.62
VPREB3-201ENST00000248948 TEP1Q99973 2627 aaKnown RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 A0A1W2PR80 420 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF726A6NNF4 738 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CENPBD1B2RD01 187 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 SHISA9B4DS77 424 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 C11orf98E9PRG8 122 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 M0R1B8 84 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 FFAR1O14842 300 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ARPC2O15144 300 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 RNF13O43567 381 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 SMPD2O60906 423 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 IFNGR1P15260 489 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CDH2P19022 906 aaPredicted RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CALB2P22676 271 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CSNK1A1P48729 337 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 DAP3P51398 398 aaKnown RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ZNF83P51522 516 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CDH11P55287 796 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 BIDP55957 195 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 RPS4XP62701 263 aaKnown RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 RPL18Q07020 188 aaKnown RBP11.17□□□□□ -0.62
VPREB3-201ENST00000248948 CEACAM16Q2WEN9 425 aa11.17□□□□□ -0.62
VPREB3-201ENST00000248948 ANKDD1AQ495B1 522 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms