RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 ABLIM2Q6H8Q1 611 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 TMPPEQ6ZT21 453 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 DHFR2Q86XF0 187 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ARMC8Q8IUR7 673 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 OR52P1PQ8NH57 321 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 MUS81Q96NY9 551 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 GORASP2Q9H8Y8 452 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 SERINC1Q9NRX5 453 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 ADPRHL2Q9NX46 363 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 UPB1Q9UBR1 384 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 SLC7A8Q9UHI5 535 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 TMEFF2Q9UIK5 374 aaPredicted RBP12.03□□□□□ -0.48
DDX39A-201ENST00000242776 RPS6KA6Q9UK32 745 aa12.03□□□□□ -0.48
DDX39A-201ENST00000242776 CENPVL1A0A0U1RR11 272 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 LOC390937A0A1W2PQ73 354 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 AGAP5A6NIR3 686 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF716A6NP11 495 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 NDUFS8O00217 210 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 UGT2B17O75795 530 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 VENTXO95231 258 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 UBTFL6P0CB48 400 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 NCK1P16333 377 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 APEX1P27695 318 aaKnown RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 MSX2P35548 267 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 OR2B6P58173 313 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 CSNK2A1P68400 391 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SWI5Q1ZZU3 235 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SYT14P1Q58G82 188 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SLC25A53Q5H9E4 307 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 LCN8Q6JVE9 175 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 CMIPQ8IY22 773 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 LZICQ8WZA0 190 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SNX18Q96RF0 628 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SLC17A5Q9NRA2 495 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SLC13A4Q9UKG4 626 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SAMD4AQ9UPU9 718 aaKnown RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 POMPQ9Y244 141 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 ZNF443Q9Y2A4 671 aaPredicted RBP12.02□□□□□ -0.48
DDX39A-201ENST00000242776 SLC35A3Q9Y2D2 325 aa12.02□□□□□ -0.48
DDX39A-201ENST00000242776 NPIPB9F8W1W9 429 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 M0QX08 132 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 MFN2O95140 757 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 SERPINA1P01009 418 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 PRKAR1BP31321 381 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 ACTG1P63261 375 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 CCNIQ14094 377 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 C1orf146Q5VVC0 180 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 OR7E24Q6IFN5 339 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 HMGN2P46Q86SG4 172 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 ZHX1-C8orf76Q96EF9 292 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 ARL5BQ96KC2 179 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 OR11A1Q9GZK7 315 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 EVA1AQ9H8M9 152 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 CTPS2Q9NRF8 586 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 SLC7A10Q9NS82 523 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 BAG5Q9UL15 447 aa12.02□□□□□ -0.49
DDX39A-201ENST00000242776 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 SERINC4A6NH21 518 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 EIF4E2O60573 245 aaKnown RBP12.01□□□□□ -0.49
DDX39A-201ENST00000242776 ZNF682O95780 498 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 OPN1SWP03999 348 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 RYKP34925 604 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 HIKESHIQ53FT3 197 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 CYBRD1Q53TN4 286 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 RNF220Q5VTB9 566 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 DHRS4L2Q6PKH6 230 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 KLHL24Q6TFL4 600 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 CYP2R1Q6VVX0 501 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 CBLL1Q75N03 491 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 EIF3MQ7L2H7 374 aaKnown RBP12.01□□□□□ -0.49
DDX39A-201ENST00000242776 VRK2Q86Y07 508 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 ZCCHC24Q8N2G6 241 aaKnown RBP12.01□□□□□ -0.49
DDX39A-201ENST00000242776 ZNF563Q8TA94 476 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 UTP4Q969X6 686 aaKnown RBP12.01□□□□□ -0.49
DDX39A-201ENST00000242776 TAMM41Q96BW9 452 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 KCNS3Q9BQ31 491 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 METTL17Q9H7H0 456 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-201ENST00000242776 MALT1Q9UDY8 824 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 AMDHD2Q9Y303 409 aa12.01□□□□□ -0.49
DDX39A-201ENST00000242776 SH3PXD2BA1X283 911 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 AQP12BA6NM10 295 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 ACOT8O14734 319 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 CSTAP01040 98 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 EGR1P18146 543 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 ATP6V1B2P21281 511 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 SERPINF1P36955 418 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 PRPS1P60891 318 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 SELENOWP63302 87 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 TUBA1BP68363 451 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 TUBA4AP68366 448 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 KCNJ10P78508 379 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 MS4A2Q01362 244 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 SKP2Q13309 424 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 TRIP10Q15642 601 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 MAPK14Q16539 360 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 MRPL2Q5T653 305 aaKnown RBP12□□□□□ -0.49
DDX39A-201ENST00000242776 TSPO2Q5TGU0 170 aa12□□□□□ -0.49
DDX39A-201ENST00000242776 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms