RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TMEM183BQ1AE95 376 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 CPXM2Q8N436 756 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 OR13C3Q8NGS6 347 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 FIBINQ8TAL6 211 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 ACTL8Q9H568 366 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 FBRSQ9HAH7 460 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 C1orf123Q9NWV4 160 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 CLDN7O95471 211 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 OR2T7P0C7T2 308 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 SSBP1Q04837 148 aaKnown RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 KLF9Q13886 244 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 Q499Y3 187 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 THNSL2Q86YJ6 484 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 OR2T27Q8NH04 317 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 NUBPLQ8TB37 319 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MED20Q9H944 212 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 DHCR7Q9UBM7 475 aaKnown RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 IGHA2P01877 340 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MMP10P09238 476 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 GDI1P31150 447 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 TCEA2Q15560 299 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 FNDC3BQ53EP0 1204 aaKnown RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 THEM4Q5T1C6 240 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 FKBP1CQ5VVH2 108 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 KCTD18Q6PI47 426 aaPredicted RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 TECPR1Q7Z6L1 1165 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MTMR14Q8NCE2 650 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 C22orf15Q8WYQ4 148 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 HIST1H2BAQ96A08 127 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 LRIG1Q96JA1 1093 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 RTP3Q9BQQ7 232 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 URM1Q9BTM9 101 aaKnown RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 SLC25A31Q9H0C2 315 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 CWH43Q9H720 699 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MVB12BQ9H7P6 319 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 A0A1B0GTL3 188 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 RAB27BO00194 218 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 NT5EP21589 574 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 TAF10Q12962 218 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 AMZ1Q400G9 498 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 SLC38A5Q8WUX1 472 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 OR1F2PQ96R84 312 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 WWTR1Q9GZV5 400 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 TLNRD1Q9H1K6 362 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 NDOR1Q9UHB4 597 aa11.91□□□□□ -0.5
VAMP4-201ENST00000236192 MYO18AQ92614 2054 aaKnown RBP11.91□□□□□ -0.5
VAMP4-201ENST00000236192 NFKBIEO00221 500 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ICOSLGO75144 302 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 GPR1P46091 355 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 UBE2V2Q15819 145 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 FAM219BQ5XKK7 198 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 FOXJ1Q92949 421 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 FAM210BQ96KR6 192 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 A4GALTQ9NPC4 353 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 PRDM7Q9NQW5 492 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 IFITM5A6NNB3 132 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 GPR89AB7ZAQ6 455 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 GPR89BP0CG08 455 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 HNRNPA3P51991 378 aaKnown RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 HERV-K104P61576 105 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 GAB1Q13480 694 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 COL5A1-AS1Q5SY13 56 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 NKAIN2Q5VXU1 208 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 POMZP3Q6PJE2 187 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 CDS1Q92903 461 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ORAI1Q96D31 301 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 KCNJ15Q99712 375 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 NMNAT2Q9BZQ4 307 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 KCNG2Q9UJ96 466 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 CLEC4EQ9ULY5 219 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 NAV1Q8NEY1 1877 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ANKRD20A5PA0PJZ0 165 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 PIRO00625 290 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 SOX15O60248 233 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF354AO60765 605 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 STK17BO94768 372 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 CD96P40200 585 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 TARBP2Q15633 366 aaKnown RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 LEMD1Q68G75 181 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 TMEM220Q6QAJ8 160 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 SPNS3Q6ZMD2 512 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ZNF620Q6ZNG0 422 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 GPR142Q7Z601 462 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 METTL21AQ8WXB1 218 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 ASB17Q8WXJ9 295 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 UBL7Q96S82 380 aaPredicted RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 XKRY2A2RUG3 117 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 HEPACAM2A8MVW5 462 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 EMC8O43402 210 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 CNMDO75829 334 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 DAOP14920 347 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 AGFG1P52594 562 aaKnown RBP11.9□□□□□ -0.5
VAMP4-201ENST00000236192 SLC17A1Q14916 467 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 HYAL4Q2M3T9 481 aa11.9□□□□□ -0.5
VAMP4-201ENST00000236192 PIANPQ8IYJ0 282 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms