RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SNAPC3Q92966 411 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF582Q96NG8 517 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-201ENST00000223398 SDF2Q99470 211 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MMP28Q9H239 520 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 HRH3Q9Y5N1 445 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 MT-ND4P03905 459 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 PRKACBP22694 351 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 EDDM3AQ14507 147 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 FAM199XQ6PEV8 388 aaPredicted RBP16.97■□□□□ 0.31
CLIP2-201ENST00000223398 TMEM92Q6UXU6 159 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 GDPGP1Q6ZNW5 385 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 WFDC8Q8IUA0 241 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 CMIPQ8IY22 773 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 OR6F1Q8NGZ6 308 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 DCUN1D4Q92564 292 aa16.97■□□□□ 0.31
CLIP2-201ENST00000223398 SYT5O00445 386 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 SELENOFO60613 162 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 IFNA17P01571 189 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 FUNDC1Q8IVP5 155 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 IP6K3Q96PC2 410 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 SELENOIQ9C0D9 397 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 CACNG2Q9Y698 323 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 CDK5RAP2Q96SN8 1893 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 IGHV3-15A0A0B4J1V0 119 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 HMX2A2RU54 273 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 CEBPZOSA8MTT3 80 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 H0YIG0 161 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 RHEBQ15382 184 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 GDPD1Q8N9F7 314 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 SCCPDHQ8NBX0 429 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ABHD4Q8TB40 342 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 FNDC8Q8TC99 324 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 NOX4Q9NPH5 578 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 CCDC187A0A096LP49 1063 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 A0A0G2JMP0 313 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 KCNK2O95069 426 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 SLC34A2O95436 690 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ALPLP05186 524 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 AGFG1P52594 562 aaKnown RBP16.96■□□□□ 0.31
CLIP2-201ENST00000223398 OR4M2Q8NGB6 313 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 C16orf52Q8NHV5 167 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 TMEM106AQ96A25 262 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 CRLF2Q9HC73 371 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ENPP5Q9UJA9 477 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 A0A1W2PQ09 198 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ARHGAP33O14559 1287 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 PIAS2O75928 621 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 TPPPO94811 219 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 EVI2BP34910 448 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 APOBEC1P41238 236 aaKnown RBP16.96■□□□□ 0.31
CLIP2-201ENST00000223398 SLC6A12P48065 614 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 DUSP7Q16829 419 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF385BQ569K4 471 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 MUL1Q969V5 352 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 ZNF707Q96C28 371 aaPredicted RBP16.96■□□□□ 0.31
CLIP2-201ENST00000223398 DUSP22Q9NRW4 184 aa16.96■□□□□ 0.31
CLIP2-201ENST00000223398 IFNA1P01562 189 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 BDKRB2P30411 391 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 TRIM23P36406 574 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 SLX4IPQ5VYV7 408 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 TRILQ7L0X0 811 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 TPRA1Q86W33 373 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 MAML2Q8IZL2 1156 aaPredicted RBP16.96■□□□□ 0.3
CLIP2-201ENST00000223398 EMC7Q9NPA0 242 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.3
CLIP2-201ENST00000223398 STK17BO94768 372 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 PGAP1Q75T13 922 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 GHSRQ92847 366 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 GPR78Q96P69 363 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 RABL2AQ9UBK7 228 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 RABL2BQ9UNT1 228 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 A0A096LPE4 126 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 A0A1W2PPZ6 126 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 H7C2Y5 167 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TK1P04183 234 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TEAD1P28347 426 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 FAPQ12884 760 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 RAB31Q13636 194 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SUN5Q8TC36 379 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SPIN2AQ99865 258 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SPIN2BQ9BPZ2 258 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 MRPS28Q9Y2Q9 187 aaKnown RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 ATP23Q9Y6H3 246 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 ANKRD34BA5PLL1 514 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 OR2T7P0C7T2 308 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 OPRL1P41146 370 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SLC1A3P43003 542 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 OR2T27Q8NH04 317 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 MZB1Q8WU39 189 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 KCNE4Q8WWG9 221 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 UTP4Q969X6 686 aaKnown RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 FGGYQ96C11 551 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM38AQ9H6F2 299 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 ZNF286AQ9HBT8 521 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 GCM1Q9NP62 436 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TMEM212A6NML5 194 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 TP53P04637 393 aaPredicted RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 SNRPBP14678 240 aaKnown RBP16.95■□□□□ 0.3
CLIP2-201ENST00000223398 AKR1C8PQ5T2L2 129 aa16.95■□□□□ 0.3
CLIP2-201ENST00000223398 ANKRD13BQ86YJ7 626 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms