RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SLC6A19Q695T7 634 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 GATSQ8NAP1 163 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 OR5AK2Q8NH90 309 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 G6PC3Q9BUM1 346 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 GSX2Q9BZM3 304 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 SLITRK2Q9H156 845 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 FRRS1LQ9P0K9 344 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 MRM2Q9UI43 246 aaKnown RBP15.74■□□□□ 0.11
USB1-201ENST00000219281 CD207Q9UJ71 328 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 OR10H1Q9Y4A9 318 aa15.74■□□□□ 0.11
USB1-201ENST00000219281 IGKV1D-42A0A075B6H8 117 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 A0A1W2PPL8 197 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 TNFRSF10CO14798 259 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 UPK3AO75631 287 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 IFNA16P05015 189 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 TACSTD2P09758 323 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 CT45A8P0DMV1 189 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 CT45A9P0DMV2 189 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 IFNGR1P15260 489 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 CXCL2P19875 107 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 PLA2G7Q13093 441 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 ALKBH1Q13686 389 aaKnown RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 Q499Y3 187 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 CT45A2Q5DJT8 189 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 LIPNQ5VXI9 398 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 TMEM65Q6PI78 240 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 SLC16A9Q7RTY1 509 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 FAM220AQ7Z4H9 259 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 DND1Q8IYX4 353 aaKnown RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 SPICQ8N5J4 248 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 BCORP1Q8N888 145 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 MIB2Q96AX9 1013 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 CLIP3Q96DZ5 547 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 ELMOD3Q96FG2 381 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 TCEAL2Q9H3H9 227 aaPredicted RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 SRA1Q9HD15 236 aaKnown RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 TAS2R5Q9NYW4 299 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 FBXL3Q9UKT7 428 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 OR5K3A6NET4 321 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 H3BSH0 61 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 ACOT7O00154 380 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 PRKNO60260 465 aaPredicted RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 CREBL2O60519 120 aaPredicted RBP15.73■□□□□ 0.11
USB1-201ENST00000219281 MAS1P04201 325 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 GABRG2P18507 467 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 GRK6P43250 576 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 THEM6Q8WUY1 208 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 SFXN2Q96NB2 322 aa15.73■□□□□ 0.11
USB1-201ENST00000219281 USP34Q70CQ2 3546 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ELOA3DA6NLF2 546 aaPredicted RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 C2CD4DB7Z1M9 353 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 CPN1P15169 458 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ST6GAL1P15907 406 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 PSMD4P55036 377 aaKnown RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 BTG2P78543 158 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 MRPS10P82664 201 aaKnown RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 MAT1AQ00266 395 aaKnown RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 CBFBQ13951 182 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ELOA3BQ3SY89 546 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 LRRTM1Q86UE6 522 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 TMPRSS12Q86WS5 348 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 KNL1Q8NG31 2342 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ELOA3Q8NG57 546 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 MOGAT1Q96PD6 335 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 GPX7Q96SL4 187 aaPredicted RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 MRI1Q9BV20 369 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 SEMA4CQ9C0C4 833 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ZNF576Q9H609 170 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 ARHGEF17Q96PE2 2063 aaPredicted RBP15.72■□□□□ 0.11
USB1-201ENST00000219281 COL4A2P08572 1712 aa15.72■□□□□ 0.11
USB1-201ENST00000219281 TCRBV21S2A2A0A5A6 115 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 PLSCR5A0PG75 271 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 TVP23AA6NH52 213 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 L7N2F9 121 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 NDUFB6O95139 128 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 CELA2BP08218 269 aaPredicted RBP15.71■□□□□ 0.11
USB1-201ENST00000219281 GIPP09681 153 aaPredicted RBP15.71■□□□□ 0.11
USB1-201ENST00000219281 ITPKBP27987 946 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 CTXN1P60606 82 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 MFSD13AQ14CX5 517 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 ZNF542PQ5EBM4 170 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 ZNF626Q68DY1 528 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 NHLRC1Q6VVB1 395 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 Q6ZSR6 202 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 FRMD1Q8N878 549 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 LSM14AQ8ND56 463 aaKnown RBP15.71■□□□□ 0.11
USB1-201ENST00000219281 OR52B4Q8NGK2 314 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 C16orf52Q8NHV5 167 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 SLC37A2Q8TED4 501 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 C8orf33Q9H7E9 229 aaPredicted RBP15.71■□□□□ 0.11
USB1-201ENST00000219281 GPN1Q9HCN4 374 aaPredicted RBP15.71■□□□□ 0.11
USB1-201ENST00000219281 RDH8Q9NYR8 311 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 ERVK-19Q9WJR5 959 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 FANCMQ8IYD8 2048 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 H7C1C5 153 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 PRAMEF2O60811 474 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 CTNSO60931 367 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 TMEM127O75204 238 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 F13BP05160 661 aa15.71■□□□□ 0.11
USB1-201ENST00000219281 ATXN8OSP0DMR3 200 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms