RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 MSI2Q96DH6 328 aaKnown RBP13.75□□□□□ -0.21
ERCC1-201ENST00000013807 ANKRD27Q96NW4 1050 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 EPYCQ99645 322 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 EBF4Q9BQW3 602 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 TMEM43Q9BTV4 400 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 RAB1BQ9H0U4 201 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 IKZF5Q9H5V7 419 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 CCDC167Q9P0B6 97 aa13.75□□□□□ -0.21
ERCC1-201ENST00000013807 IGHV2OR16-5A0A0B4J2B6 119 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 PHF1O43189 567 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 FMO6PO60774 539 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 SERPINB7O75635 380 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 HPRP00739 348 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 BGLAPP02818 100 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 CELA3BP08861 270 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF23P17027 643 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 NPR2P20594 1047 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 SLC6A2P23975 617 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 THBS4P35443 961 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 EVX1P49640 407 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 PCBP3P57721 371 aaKnown RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 PHYHD1Q5SRE7 291 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 FAM166AQ6J272 317 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 SLC46A3Q7Z3Q1 461 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 PXKQ7Z7A4 578 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 NEU4Q8WWR8 484 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF607Q96SK3 696 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 DENND2DQ9H6A0 471 aaPredicted RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 TMEM27Q9HBJ8 222 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 SLCO1B3Q9NPD5 702 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 MRPL39Q9NYK5 338 aaKnown RBP13.74□□□□□ -0.21
ERCC1-201ENST00000013807 USP22Q9UPT9 525 aa13.74□□□□□ -0.21
ERCC1-201ENST00000013807 IGHV4-61A0A0C4DH41 118 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 MFN2O95140 757 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 STAMBPO95630 424 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 C8BP07358 591 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 IGFBP1P08833 259 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-201ENST00000013807 TACSTD2P09758 323 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF16P17020 682 aaPredicted RBP13.73□□□□□ -0.21
ERCC1-201ENST00000013807 IGFBP5P24593 272 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 SCARB2Q14108 478 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 GGTLC2Q14390 218 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 OR1Q1Q15612 314 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 UEVLDQ8IX04 471 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 ANKS4BQ8N8V4 417 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 HIPK4Q8NE63 616 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 WFDC6Q9BQY6 131 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 NOX1Q9Y5S8 564 aa13.73□□□□□ -0.21
ERCC1-201ENST00000013807 SLC35F4A4IF30 521 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 EVPLLA8MZ36 301 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 hCG_2039718K7EN88 272 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 MT-ATP6P00846 226 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF35P13682 527 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 HLA-DOBP13765 273 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 APEHP13798 732 aaKnown RBP13.72□□□□□ -0.21
ERCC1-201ENST00000013807 NR4A1P22736 598 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 RGS8P57771 180 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-201ENST00000013807 PUDPQ08623 228 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 RBBP4Q09028 425 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 RUNDC3AQ59EK9 446 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF613Q6PF04 617 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 MDP1Q86V88 176 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF786Q8N393 782 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 DPP10Q8N608 796 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 LRRC8CQ8TDW0 803 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 HPS1Q92902 700 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 C1orf159Q96HA4 380 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 MOGAT1Q96PD6 335 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 CPPED1Q9BRF8 314 aaPredicted RBP13.72□□□□□ -0.21
ERCC1-201ENST00000013807 REPIN1Q9BWE0 567 aaKnown RBP13.72□□□□□ -0.21
ERCC1-201ENST00000013807 ASPNQ9BXN1 380 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 NOX3Q9HBY0 568 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 KCNS2Q9ULS6 477 aa13.72□□□□□ -0.21
ERCC1-201ENST00000013807 LOC100289279A0A1B0GTE1 492 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 PLPP3O14495 311 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF14P17017 642 aaPredicted RBP13.71□□□□□ -0.21
ERCC1-201ENST00000013807 AQP5P55064 265 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 CDH12P55289 794 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 SQLEQ14534 574 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 VHLLQ6RSH7 139 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 RANBP3LQ86VV4 465 aaPredicted RBP13.71□□□□□ -0.21
ERCC1-201ENST00000013807 SNX32Q86XE0 403 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 PTOV1Q86YD1 416 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 ARMC8Q8IUR7 673 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 TSPEARQ8WU66 669 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 TXNDC15Q96J42 360 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 ARHGDIGQ99819 225 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 BPESC1Q9GZL8 116 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 ZNF224Q9NZL3 707 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 SELENONQ9NZV5 590 aa13.71□□□□□ -0.21
ERCC1-201ENST00000013807 NBEAL1Q6ZS30 2694 aa13.7□□□□□ -0.22
ERCC1-201ENST00000013807 M0R3G1 203 aa13.7□□□□□ -0.22
ERCC1-201ENST00000013807 LILRA1O75019 489 aa13.7□□□□□ -0.22
ERCC1-201ENST00000013807 ERCC1P07992 297 aaPredicted RBP13.7□□□□□ -0.22
ERCC1-201ENST00000013807 DAOP14920 347 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms