RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Heatr5aQ5PRF0 2038 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Adamts3E9Q287 1204 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 BlkP16277 499 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Zfp37P17141 594 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Olfr517Q7TRU4 314 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 RhbgQ8BUX5 455 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Rnf208Q8K0W3 265 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Vmn1r226Q8R2A8 298 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 St3gal6Q8VIB3 329 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Thyn1Q91YJ3 226 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Nmrk2Q9D7C9 195 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 PmpcaQ9DC61 524 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Usp18Q9WTV6 368 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Tsc2Q61037 1814 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Alpk2Q91ZB0 2144 aa4.28□□□□□ -1.72
Prkdc-201ENSMUST00000023352 Cfap77A0A087WRI3 283 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn2r112L7N221 857 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mamld1P0C6A2 803 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Lef1P27782 397 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fgf9P54130 208 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 HnrnpkP61979 463 aaKnown RBP4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Hoxd13P70217 339 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 KhkP97328 298 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Amz2Q400C8 359 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Scarb1Q61009 509 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Pou4f3Q63955 338 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr1308Q7TQX0 320 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fbxo5Q7TSG3 421 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Casp9Q8C3Q9 454 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fam78aQ8C552 283 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Lgi4Q8K1S1 537 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Cables2Q8K3M5 476 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 IdnkQ8R0J8 184 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr340Q8VGL0 312 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Sntb1Q99L88 537 aaKnown RBP4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mcts1Q9DB27 181 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Irak1bp1Q9ESJ7 259 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gm13276A0A087WR18 182 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gm35060A0A140LIV7 231 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Vmn1r159K7N701 305 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Etv4P28322 485 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Adh5P28474 374 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 VaspP70460 375 aaKnown RBP4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Hif3aQ0VBL6 662 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Rhox4gQ2MDF7 205 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 InipQ3TXT3 104 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Csnk2a1Q60737 391 aaKnown RBP4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Galnt10Q6P9S7 603 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 IpmkQ7TT16 396 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Znf2Q8BIQ3 427 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Cpne4Q8BLR2 557 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Naa40Q8VE10 237 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr1423Q8VFV0 310 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 EbplQ9D0P0 206 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 IcaQ9DBD0 700 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Cbll1Q9JIY2 491 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr740E9PV79 311 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Bcat2O35855 393 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 P10404 641 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ptpn22P29352 802 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tm9sf2P58021 662 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Htr1aQ64264 421 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Slc6a7Q6PGE7 637 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Kctd12Q6WVG3 327 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 CenpoQ8K015 298 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Q8R3C1 574 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr77Q8VEY9 312 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr800Q8VFH7 311 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr283Q8VGU2 309 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Sytl3Q99N48 607 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Lurap1Q9D6I9 239 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 PbkQ9JJ78 330 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Zfp825A0A1Y7VK00 292 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Btnl4A2CG29 586 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ssxa1B1AUS7 101 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Enpp7D3Z6V6 446 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Olfr419E9Q0Y7 313 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fbxw28E9Q8A4 466 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Cd81P35762 236 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Cd38P56528 304 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Gpr15Q0VDU3 360 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 H2-Eb2Q3UUV9 287 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Naa50Q6PGB6 169 aaKnown RBP4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ptx4Q6RUU0 478 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Bcas1Q80YN3 633 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Slc7a6Q8BGK6 515 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 NagpaQ8BJ48 517 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tsen54Q8C2A2 525 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 SpartQ8R1X6 671 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tmprss4Q8VCA5 435 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ak6Q8VCP8 172 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Mpped1Q91ZG2 326 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Tmem218Q9CQ44 115 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Ogfod3Q9D136 315 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Clca3a1Q9QX15 902 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 4930444P10RikD3YUR1 185 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Pim1P06803 397 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 S100a8P27005 89 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Fut7Q11131 389 aa4.27□□□□□ -1.73
Prkdc-201ENSMUST00000023352 Riiad1Q3KNY5 119 aa4.27□□□□□ -1.73
Retrieved 100 of 22,080 RNA–protein pairs in 67.6 ms