RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	CNN3	Q15417	329 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SSX1	Q16384	188 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NTRK2	Q16620	822 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ATP6V1F	Q16864	119 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NKAPL	Q5M9Q1	402 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	C6orf136	Q5SQH8	315 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	HENMT1	Q5T8I9	393 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ANKRD34A	Q69YU3	496 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3C	Q6IPX1	549 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	PARM1	Q6UWI2	310 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF813	Q6ZN06	617 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	DEF8	Q6ZN54	512 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SSX7	Q7RTT5	188 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR4N4	Q8N0Y3	316 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	MMP21	Q8N119	569 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	C2orf73	Q8N5S3	287 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	KRTCAP2	Q8N6L1	136 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	AQP11	Q8NBQ7	271 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	C17orf47	Q8NEP4	570 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR9Q2	Q8NGE9	314 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR4C6	Q8NH72	309 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NUBPL	Q8TB37	319 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	KLK6	Q92876	244 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	GAL3ST3	Q96A11	431 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CCDC115	Q96NT0	180 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	F2RL3	Q96RI0	385 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	S100A13	Q99584	98 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	PRRT1	Q99946	306 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	PCED1A	Q9H1Q7	454 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	FBXL3	Q9UKT7	428 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF106	Q9H2Y7	1883 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	COL4A3	Q01955	1670 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	IGLV3-16	A0A075B6K0	115 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931		A0A1B0GVC2	190 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SOX1	O00570	391 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EMC8	O43402	210 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	YIF1A	O95070	293 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CDRT1	O95170	752 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SOD1	P00441	154 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ANXA2	P07355	339 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NBEAP1	P0C6P0	100 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	GGT1	P19440	569 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	MPZ	P25189	248 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NFYB	P25208	207 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CD82	P27701	267 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	BTC	P35070	178 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	IFNGR2	P38484	337 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ACAA2	P42765	397 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR3A1	P47881	315 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ARF6	P62330	175 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SELENOT	P62341	195 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	HNRNPA0	Q13151	305 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TCEA2	Q15560	299 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF311	Q5JNZ3	666 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	EOGT	Q5NDL2	527 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	TMEM220	Q6QAJ8	160 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	UBE3D	Q7Z6J8	389 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OAF	Q86UD1	273 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	MYPOP	Q86VE0	399 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CYP4Z1	Q86W10	505 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	MIER2	Q8N344	545 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR56B1	Q8NGI3	324 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR10A6	Q8NH74	314 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR14C36	Q8NHC7	312 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	DNAJB14	Q8TBM8	379 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	FGF14	Q92915	247 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	HLA-C	Q95604	372 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SMIM8	Q96KF7	97 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF48	Q96MX3	618 aa	Predicted RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	RNF2	Q99496	336 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	URM1	Q9BTM9	101 aa	Known RBP	7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ABCG5	Q9H222	651 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ACTR8	Q9H981	624 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SLC25A19	Q9HC21	320 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	AIG1	Q9NVV5	245 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ARL15	Q9NXU5	204 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CLEC5A	Q9NY25	188 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	ZIM2	Q9NZV7	527 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	GSKIP	Q9P0R6	139 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	NCDN	Q9UBB6	729 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	GULP1	Q9UBP9	304 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OPN4	Q9UHM6	478 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	SH2B3	Q9UQQ2	575 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	CCL27	Q9Y4X3	112 aa		7.32	□□□□□ -1.24
RTTN-223	ENST00000640931	OR2M5	A3KFT3	312 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	OR2W5	A6NFC9	320 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	ZNF587B	E7ETH6	402 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	AGRP	O00253	132 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	SLC19A2	O60779	497 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	OR2A4	O95047	310 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	MELTF	P08582	738 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	ELFN1	P0C7U0	828 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	MGMT	P16455	207 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	IL1RN	P18510	177 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	BCKDHB	P21953	392 aa		7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	CEACAM8	P31997	349 aa	Predicted RBP	7.31	□□□□□ -1.24
RTTN-223	ENST00000640931	MAS1L	P35410	378 aa		7.31	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms