RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 UPK3AO75631 287 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 PDE5AO76074 875 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 IGF2P01344 180 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 NQO1P15559 274 aaKnown RBP23.5■■□□□ 1.35
VEGFA-231ENST00000640499 ATP6V1B2P21281 511 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 MS4A2Q01362 244 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 TAB1Q15750 504 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 NIPAL3Q6P499 406 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 TMEM200AQ86VY9 491 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 PIK3C3Q8NEB9 887 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 SLC7A6OSQ96CW6 309 aaPredicted RBP23.5■■□□□ 1.35
VEGFA-231ENST00000640499 CLPTM1LQ96KA5 538 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 NSMCE2Q96MF7 247 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 HS6ST2Q96MM7 605 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 FNDC11Q9BVV2 318 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 NANSQ9NR45 359 aa23.5■■□□□ 1.35
VEGFA-231ENST00000640499 SPG11Q96JI7 2443 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 CASKO14936 926 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 GMNNO75496 209 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 FUT1P19526 365 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 IL32P24001 234 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 PUDPQ08623 228 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 ZP4Q12836 540 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 TRAM2Q15035 370 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 TBPL2Q6SJ96 375 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 PXKQ7Z7A4 578 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 MEX3DQ86XN8 651 aaKnown RBP23.49■■□□□ 1.35
VEGFA-231ENST00000640499 CDC20BQ86Y33 519 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 ARHGAP24Q8N264 748 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 LIPHQ8WWY8 451 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 POLDIP3Q9BY77 421 aaKnown RBP23.49■■□□□ 1.35
VEGFA-231ENST00000640499 CLEC4MQ9H2X3 399 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-231ENST00000640499 NMNAT1Q9HAN9 279 aaPredicted RBP23.49■■□□□ 1.35
VEGFA-231ENST00000640499 ZNF226Q9NYT6 803 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 MED31Q9Y3C7 131 aa23.49■■□□□ 1.35
VEGFA-231ENST00000640499 hCG_2039718K7EN88 272 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 OR7A10O76100 309 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 DIRAS1O95057 198 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 TSPAN19P0C672 248 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 DNAJA1P31689 397 aaKnown RBP23.48■■□□□ 1.35
VEGFA-231ENST00000640499 C1DQ13901 141 aaKnown RBP23.48■■□□□ 1.35
VEGFA-231ENST00000640499 GABRA6Q16445 453 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 PHYHD1Q5SRE7 291 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 C9orf135Q5VTT2 229 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 CYP2R1Q6VVX0 501 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 UEVLDQ8IX04 471 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 TMEM123Q8N131 208 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 SGTBQ96EQ0 304 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 MUS81Q96NY9 551 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 HS3ST6Q96QI5 342 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 OR2M2Q96R28 347 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 EMC6Q9BV81 110 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 LIME1Q9H400 295 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 MED29Q9NX70 200 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 ACTR3BQ9P1U1 418 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 UPB1Q9UBR1 384 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 PRPF19Q9UMS4 504 aaKnown RBP23.48■■□□□ 1.35
VEGFA-231ENST00000640499 RCE1Q9Y256 329 aa23.48■■□□□ 1.35
VEGFA-231ENST00000640499 A0A087WUU8 490 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 TCRBV5S2A0A599 114 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 C11orf98E9PRG8 122 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 RAD51DO75771 328 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 ADORA3P0DMS8 318 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 MAKP20794 623 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 POU3F1Q03052 451 aaPredicted RBP23.47■■□□□ 1.35
VEGFA-231ENST00000640499 WFDC8Q8IUA0 241 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 POMGNT2Q8NAT1 580 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 LINC00470Q9BZP3 86 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 PLEKHF2Q9H8W4 249 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 TAS2R16Q9NYV7 291 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 NOX1Q9Y5S8 564 aa23.47■■□□□ 1.35
VEGFA-231ENST00000640499 GOSR1O95249 250 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 RHCEP18577 417 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 AHCYP23526 432 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 IL1RL1Q01638 556 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 AKAP6Q13023 2319 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 FHL1Q13642 323 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 TRIM25Q14258 630 aaKnown RBP23.46■■□□□ 1.35
VEGFA-231ENST00000640499 NRMQ8IXM6 262 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 SLC7A13Q8TCU3 470 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 ACOT11Q8WXI4 607 aaPredicted RBP23.46■■□□□ 1.35
VEGFA-231ENST00000640499 HSD17B8Q92506 261 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 DHRS1Q96LJ7 313 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 FUZQ9BT04 418 aa23.46■■□□□ 1.35
VEGFA-231ENST00000640499 SLC35F4A4IF30 521 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 OR5H1A6NKK0 313 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 IFI30P13284 250 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 MPGP29372 298 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 PRKCDQ05655 676 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 BNIP1Q12981 228 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 WDR31Q8NA23 367 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 BPIFA2Q96DR5 249 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 ZNF837Q96EG3 531 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-231ENST00000640499 PIK3IP1Q96FE7 263 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 ALKBH3Q96Q83 286 aaPredicted RBP23.45■■□□□ 1.34
VEGFA-231ENST00000640499 THTPAQ9BU02 230 aa23.45■■□□□ 1.34
VEGFA-231ENST00000640499 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.44■■□□□ 1.34
VEGFA-231ENST00000640499 A0A1W2PRQ8 180 aa23.44■■□□□ 1.34
VEGFA-231ENST00000640499 ACOT8O14734 319 aa23.44■■□□□ 1.34
VEGFA-231ENST00000640499 UMPSP11172 480 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms