RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.58□□□□□ -0.46e-7■■■■■ 31
HNRNPU-229ENST00000640440 TUBA1AQ71U36 451 aa12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 NET1Q7Z628 596 aaPredicted RBP12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 TSPEARQ8WU66 669 aa12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 BCL2L2Q92843 193 aaPredicted RBP12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 ADAD1Q96M93 576 aaKnown RBP12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 EPYCQ99645 322 aa12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 ARHGDIGQ99819 225 aa12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 LINC00470Q9BZP3 86 aa12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 BARX1Q9HBU1 254 aaPredicted RBP12.58□□□□□ -0.4
HNRNPU-229ENST00000640440 TRAF3IP2O43734 574 aaPredicted RBP12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 AKAP8O43823 692 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 SSX4O60224 188 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 HPRP00739 348 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 BGLAPP02818 100 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 PCGF2P35227 344 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 SH3BGRP55822 239 aaPredicted RBP12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.44e-8■■■□□ 14.9
HNRNPU-229ENST00000640440 MFSD13AQ14CX5 517 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 NRF1Q16656 503 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 DUSP7Q16829 419 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 ZNF544Q6NX49 715 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 UEVLDQ8IX04 471 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 C10orf53Q8N6V4 93 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 ADPRHL1Q8NDY3 354 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 GPR32P1Q8NGA4 272 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 OR10A6Q8NH74 314 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 HTRA1Q92743 480 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 BOD1Q96IK1 185 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 MCHR1Q99705 422 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 ASPNQ9BXN1 380 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 REG4Q9BYZ8 158 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 NELFAQ9H3P2 528 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 KAT8Q9H7Z6 458 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 EVA1AQ9H8M9 152 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 MOKQ9UQ07 419 aa12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 ANK3Q12955 4377 aaKnown RBP12.57□□□□□ -0.4
HNRNPU-229ENST00000640440 IGHV1-18A0A0C4DH31 117 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 CPSF4LA6NMK7 179 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 INAFM1C9JVW0 142 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 FBP2O00757 339 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 HLA-DOBP13765 273 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 NUDT6P53370 316 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 ARF1P84077 181 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 PPP2R2BQ00005 443 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 NPTX1Q15818 432 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 TRMT5Q32P41 509 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 SWT1Q5T5J6 900 aaKnown RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 METTL21CQ5VZV1 264 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 CARD17Q5XLA6 110 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 ANKRD16Q6P6B7 361 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 DNM1P46Q6ZS02 220 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 SLC30A8Q8IWU4 369 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 OR6T1Q8NGN1 323 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 OR6S1Q8NH40 331 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 VANGL1Q8TAA9 524 aaPredicted RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 TAMM41Q96BW9 452 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 SLC41A3Q96GZ6 507 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 MOGAT1Q96PD6 335 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 ZNF317Q96PQ6 595 aaPredicted RBP12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 OR2M2Q96R28 347 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 KCNS3Q9BQ31 491 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 TMEM43Q9BTV4 400 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 GPR35Q9HC97 309 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 CORINQ9Y5Q5 1042 aa12.56□□□□□ -0.4
HNRNPU-229ENST00000640440 ARPC4-TTLL3A0A0A6YYG9 625 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 LOC102725191A0A1B0GVB3 256 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 LRRN3E7EW58 273 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 MS4A18H0YCH9 400 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 RPL36A-HNRNPH2H7BZ11 118 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 FMO6PO60774 539 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 C8BP07358 591 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 TROVE2P10155 538 aaKnown RBP eCLIP12.55□□□□□ -0.46e-9■□□□□ 10.6
HNRNPU-229ENST00000640440 CD247P20963 164 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 POU3F1Q03052 451 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 KRTAP1-1Q07627 177 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 PUDPQ08623 228 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 PMS2P3Q13401 168 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 CEACAM16Q2WEN9 425 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 MS4A18Q3C1V0 323 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 ENTPD8Q5MY95 495 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 ZNF613Q6PF04 617 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 PATL1Q86TB9 770 aaKnown RBP12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 RBM45Q8IUH3 476 aaKnown RBP12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 SCAIQ8N9R8 606 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 PIK3C3Q8NEB9 887 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 OR4D11Q8NGI4 311 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 MAGEE2Q8TD90 523 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 ZNF837Q96EG3 531 aaPredicted RBP12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 CCDC134Q9H6E4 229 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 CRLF2Q9HC73 371 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 MED29Q9NX70 200 aa12.55□□□□□ -0.4
HNRNPU-229ENST00000640440 COL6A5A8TX70 2615 aa12.54□□□□□ -0.4
HNRNPU-229ENST00000640440 M0R3G1 203 aa12.54□□□□□ -0.4
HNRNPU-229ENST00000640440 FXYD1O00168 92 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms