RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 APBB3O95704 486 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 AK1P00568 194 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 C19orf57Q0VDD7 668 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 LRRC69Q6ZNQ3 347 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 SLC35D2Q76EJ3 337 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 DPY19L4Q7Z388 723 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 DEFB119Q8N690 84 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 LSM14AQ8ND56 463 aaKnown RBP13.34□□□□□ -0.27
SCARB2-221ENST00000640341 C16orf52Q8NHV5 167 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 SLC25A38Q96DW6 304 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 GFI1Q99684 422 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 ZNF281Q9Y2X9 895 aa13.34□□□□□ -0.27
SCARB2-221ENST00000640341 PCDHGA9Q9Y5G4 932 aaKnown RBP13.34□□□□□ -0.27
SCARB2-221ENST00000640341 SLC35E2P0CK97 266 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 ITPKBP27987 946 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 PSMA6P60900 246 aaKnown RBP13.33□□□□□ -0.27
SCARB2-221ENST00000640341 HHEXQ03014 270 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 GAS6Q14393 721 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 FAM199XQ6PEV8 388 aaPredicted RBP13.33□□□□□ -0.27
SCARB2-221ENST00000640341 ZNF782Q6ZMW2 699 aaPredicted RBP13.33□□□□□ -0.27
SCARB2-221ENST00000640341 ZNF550Q7Z398 422 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 SLITRK4Q8IW52 837 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 POMGNT2Q8NAT1 580 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 TMEM138Q9NPI0 162 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 UBQLN2Q9UHD9 624 aa13.33□□□□□ -0.27
SCARB2-221ENST00000640341 CDV3Q9UKY7 258 aaKnown RBP13.33□□□□□ -0.27
SCARB2-221ENST00000640341 A0A0J9YY10 115 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 CHURC1-FNTBB4DL54 471 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 IFNA7P01567 189 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 CD53P19397 219 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 SQSTM1Q13501 440 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 CDONQ4KMG0 1287 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 FGD2Q7Z6J4 655 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 OR5AK2Q8NH90 309 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 OR14A16Q8NHC5 309 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 KLHDC3Q9BQ90 382 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 SLITRK2Q9H156 845 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 HAO2Q9NYQ3 351 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 OR5V1Q9UGF6 321 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 ARID1AO14497 2285 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 MEIKINA0A087WXM9 373 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 C11orf88Q6PI97 169 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 RGP1Q92546 391 aaPredicted RBP13.33□□□□□ -0.28
SCARB2-221ENST00000640341 NRSN2Q9GZP1 204 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 HEXA-AS1Q9H8Q6 139 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 PRTFDC1Q9NRG1 225 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 PNO1Q9NRX1 252 aaKnown RBP13.33□□□□□ -0.28
SCARB2-221ENST00000640341 LAMP5Q9UJQ1 280 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 SCP2D1Q9UJQ7 156 aa13.33□□□□□ -0.28
SCARB2-221ENST00000640341 OIP5O43482 229 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ITGA10O75578 1167 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SULT1A3P0DMM9 295 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SULT1A4P0DMN0 295 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TPMTP51580 245 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 GPR143P51810 404 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 NSMAFQ92636 917 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 DVL3Q92997 716 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TMEM106AQ96A25 262 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 OR8D2Q9GZM6 311 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 WDR76Q9H967 626 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 DOCK8Q8NF50 2099 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TCRBV21S2A2A0A5A6 115 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 AIPO00170 330 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ARPC5O15511 151 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 RAB38P57729 211 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 PUDPQ08623 228 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 GRM7Q14831 915 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 PCGF3Q3KNV8 242 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 OR5M10Q6IEU7 315 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ALKAL2Q6UX46 152 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SYS1Q8N2H4 156 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SLC2A12Q8TD20 617 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ZDHHC1Q8WTX9 485 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 CTHRC1Q96CG8 243 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SYT4Q9H2B2 425 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SOHLH2Q9NX45 425 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 FBXL21Q9UKT6 434 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 FXYD6-FXYD2A0A087WZ82 144 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SERINC4A6NH21 518 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TNFSF14O43557 240 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 EN2P19622 333 aaPredicted RBP13.32□□□□□ -0.28
SCARB2-221ENST00000640341 GUCA2AQ02747 115 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 CD226Q15762 336 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 PXDC1Q5TGL8 231 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 STAC2Q6ZMT1 411 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 MAMSTRQ6ZN01 415 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 OVCH1Q7RTY7 1134 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 BCORP1Q8N888 145 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 OR51D1Q8NGF3 324 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 COQ8AQ8NI60 647 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 TSEN15Q8WW01 171 aaKnown RBP13.32□□□□□ -0.28
SCARB2-221ENST00000640341 C3orf49Q96BT1 292 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 RBP7Q96R05 134 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 FXYD6Q9H0Q3 95 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 ANKRD10Q9NXR5 420 aa13.32□□□□□ -0.28
SCARB2-221ENST00000640341 SERTAD3Q9UJW9 196 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms