RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 ZNF83P51522 516 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 PUDPQ08623 228 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 SF3A3Q12874 501 aaKnown RBP eCLIP15.51■□□□□ 0.07
PTPN11-207ENST00000639857 ETFDHQ16134 617 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 C9orf135Q5VTT2 229 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 HMBOX1Q6NT76 420 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 YTHDF3Q7Z739 585 aaKnown RBP15.51■□□□□ 0.07
PTPN11-207ENST00000639857 DTX2Q86UW9 622 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 DEPDC4Q8N2C3 294 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 KDM8Q8N371 416 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 PIK3C3Q8NEB9 887 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 OR2T12Q8NG77 320 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 OR4D11Q8NGI4 311 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 VANGL1Q8TAA9 524 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-207ENST00000639857 RCN3Q96D15 328 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 C18orf12Q96KH6 178 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 CISD1Q9NZ45 108 aaKnown RBP15.51■□□□□ 0.07
PTPN11-207ENST00000639857 ARMCX1Q9P291 453 aa15.51■□□□□ 0.07
PTPN11-207ENST00000639857 MS4A18H0YCH9 400 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 UPK3AO75631 287 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 LYPD3O95274 346 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 IGF2P01344 180 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 LTBQ06643 244 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 PMS2P3Q13401 168 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 PGGHGQ32M88 737 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 MS4A18Q3C1V0 323 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 C3orf36Q3SXR2 165 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 TBRG1Q3YBR2 411 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 ANKRD16Q6P6B7 361 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 TTC33Q6PID6 262 aaPredicted RBP15.5■□□□□ 0.07
PTPN11-207ENST00000639857 PXKQ7Z7A4 578 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 BIVMQ86UB2 503 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 TMEM123Q8N131 208 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 GPR137CQ8N3F9 429 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 FAM169BQ8N8A8 192 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 OR5J2Q8NH18 312 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 TRMT61AQ96FX7 289 aaKnown RBP15.5■□□□□ 0.07
PTPN11-207ENST00000639857 LRR1Q96L50 414 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 MOGAT1Q96PD6 335 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 OR2M2Q96R28 347 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 BDH2Q9BUT1 245 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 FKRPQ9H9S5 495 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 SLC7A7Q9UM01 511 aa15.5■□□□□ 0.07
PTPN11-207ENST00000639857 A0A1W2PR80 420 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 FAM171A2A8MVW0 826 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 M0R1B8 84 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 NDUFAB1O14561 156 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 SOD3P08294 240 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 THRBP10828 461 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 COX4I1P13073 169 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 RBM34P42696 430 aaKnown RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 SLC25A3Q00325 362 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 IL1RL1Q01638 556 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 ROR2Q01974 943 aaKnown RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 ZNF74Q16587 644 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 SLC22A25Q6T423 547 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 HACD2Q6Y1H2 254 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 WDR88Q6ZMY6 472 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 LINGO2Q7L985 606 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 SPATA21Q7Z572 469 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 CARM1Q86X55 608 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 RBM45Q8IUH3 476 aaKnown RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 MICU2Q8IYU8 434 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 C10orf53Q8N6V4 93 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 BCL2L2Q92843 193 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 NEUROG1Q92886 237 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 GTPBP3Q969Y2 492 aaKnown RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 DHRS9Q9BPW9 319 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 HOPXQ9BPY8 73 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 TRAF4Q9BUZ4 470 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-207ENST00000639857 ALG2Q9H553 416 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 SH3GLB1Q9Y371 365 aa15.49■□□□□ 0.07
PTPN11-207ENST00000639857 ELOVL7A1L3X0 281 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 PLPP3O14495 311 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 OR5F1O95221 314 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 HPRP00739 348 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 THY1P04216 161 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 CDH2P19022 906 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-207ENST00000639857 KDELR2P33947 212 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 ATP5J2P56134 94 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 UBE2NP61088 152 aaKnown RBP15.48■□□□□ 0.07
PTPN11-207ENST00000639857 POU3F1Q03052 451 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-207ENST00000639857 LGALS3BPQ08380 585 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 HIKESHIQ53FT3 197 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 AGAP6Q5VW22 663 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 ZNF544Q6NX49 715 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 CCDC36Q8IYA8 594 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 POU5F2Q8N7G0 328 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 COX4I2Q96KJ9 171 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 Q96MF0 132 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 NSRP1Q9H0G5 558 aaKnown RBP15.48■□□□□ 0.07
PTPN11-207ENST00000639857 EFCAB1Q9HAE3 211 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 NANSQ9NR45 359 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 CRNNQ9UBG3 495 aaPredicted RBP15.48■□□□□ 0.07
PTPN11-207ENST00000639857 ZNF229Q9UJW7 825 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 POU2F3Q9UKI9 436 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 ALPK2Q86TB3 2170 aa15.48■□□□□ 0.07
PTPN11-207ENST00000639857 INHBBP09529 407 aa15.47■□□□□ 0.07
PTPN11-207ENST00000639857 CBLP22681 906 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms