RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 CD1AP06126 327 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 PNLIPP16233 465 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 TALDO1P37837 337 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 P2RX1P51575 399 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 ACY1Q03154 408 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 NR0B2Q15466 257 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 C16orf47Q6ZP98 133 aaPredicted RBP19.51■□□□□ 0.71
CLN6-224ENST00000638076 SLC16A9Q7RTY1 509 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 KANSL1Q7Z3B3 1105 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 DTX3Q8N9I9 347 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 OR4M1Q8NGD0 313 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 COLQQ9Y215 455 aaPredicted RBP19.51■□□□□ 0.71
CLN6-224ENST00000638076 A0A1W2PQM1 296 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 UCHL1P09936 223 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 MAP2K3P46734 347 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 QPRTQ15274 297 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 SLC25A36Q96CQ1 311 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 NPFFR2Q9Y5X5 522 aa19.51■□□□□ 0.71
CLN6-224ENST00000638076 LY6G6EA0A0G2JKS1 128 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 A0A1B0GVC2 190 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 TMEM72A0PK05 275 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 A6NIN4 97 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 C11orf98E9PRG8 122 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 GATBO75879 557 aaKnown RBP19.5■□□□□ 0.71
CLN6-224ENST00000638076 CCL7P80098 99 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 ZNF684Q5T5D7 378 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 OR6V1Q8N148 313 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 DUSP19Q8WTR2 217 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 TAS2R5Q9NYW4 299 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 U3KQA8 63 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 IGLV3-12A0A075B6K2 115 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 OR6C70A6NIJ9 312 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 SIGLEC6O43699 453 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 SUSD5O60279 629 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 HEXBP07686 556 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 NPR2P20594 1047 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 INPP1P49441 399 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 NKAIN1Q4KMZ8 207 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 TRILQ7L0X0 811 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 ANKRD37Q7Z713 158 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 TIGD4Q8IY51 512 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 APCDD1LQ8NCL9 501 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 OR2T4Q8NH00 348 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 GPR119Q8TDV5 335 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 PTDSS2Q9BVG9 487 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 KLHDC2Q9Y2U9 406 aa19.5■□□□□ 0.71
CLN6-224ENST00000638076 CACNA1EQ15878 2313 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 TMED7-TICAM2A0A0A6YYA0 188 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 A0A1B0GTQ1 180 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 TVP23AA6NH52 213 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 FLRT2O43155 660 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 RENP00797 406 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 PRKAR1AP10644 381 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 RBMS1P29558 406 aaKnown RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 POLR2HP52434 150 aaKnown RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 NANOS3P60323 173 aaKnown RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 CEP78Q5JTW2 689 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 RSBN1Q5VWQ0 802 aaPredicted RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 GPR139Q6DWJ6 353 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 UBALD2Q8IYN6 164 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 SAP25Q8TEE9 199 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 THAP3Q8WTV1 239 aaPredicted RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 ADAD1Q96M93 576 aaKnown RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 KCNJ15Q99712 375 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 SYT4Q9H2B2 425 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 RNF121Q9H920 327 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 RBFOX1Q9NWB1 397 aaKnown RBP19.49■□□□□ 0.71
CLN6-224ENST00000638076 TMED7Q9Y3B3 224 aa19.49■□□□□ 0.71
CLN6-224ENST00000638076 NOTOA8MTQ0 251 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 ARHGEF9O43307 516 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 LYRM1O43325 122 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 GPRIN2O60269 458 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 SCRG1O75711 98 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 ANKRD34CP0C6C1 535 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 SQSTM1Q13501 440 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 KCNJ8Q15842 424 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 PWWP2BQ6NUJ5 590 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 MZT2BQ6NZ67 158 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 MAMDC2Q7Z304 686 aaPredicted RBP19.48■□□□□ 0.71
CLN6-224ENST00000638076 ADGRG3Q86Y34 549 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 SEMA4CQ9C0C4 833 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 RPP14O95059 124 aaKnown RBP19.48■□□□□ 0.71
CLN6-224ENST00000638076 OR8G3PP0DMU2 310 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 EPXP11678 715 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 PRKCAP17252 672 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 ATF1P18846 271 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 HSD17B12Q53GQ0 312 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 SCAIQ8N9R8 606 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 OR5H6Q8NGV6 325 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 OR6F1Q8NGZ6 308 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 CEP76Q8TAP6 659 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 RPS4Y2Q8TD47 263 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 RELTQ969Z4 430 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 RNF166Q96A37 237 aaPredicted RBP19.48■□□□□ 0.71
CLN6-224ENST00000638076 FRMD6Q96NE9 622 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 TAS2R10Q9NYW0 307 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 POU2F3Q9UKI9 436 aa19.48■□□□□ 0.71
CLN6-224ENST00000638076 AK6Q9Y3D8 172 aaKnown RBP19.48■□□□□ 0.71
CLN6-224ENST00000638076 IGHV5-10-1A0A0J9YXX1 117 aa19.47■□□□□ 0.71
CLN6-224ENST00000638076 MT-ATP6P00846 226 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms