RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SEC14L5O43304 696 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 GLSO94925 669 aaPredicted RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 F10P00742 488 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 HPNP05981 417 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 HIST1H1CP16403 213 aaKnown RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 PCMT1P22061 227 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 ACVR2AP27037 513 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 TNFSF10P50591 281 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 B3GALT5-AS1P59052 145 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 ERVK-25P63136 954 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 CSNK2A1P68400 391 aaPredicted RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 TLE3Q04726 772 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLN6-219ENST00000637329 ST3GAL4Q11206 333 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 ITGADQ13349 1161 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 KRR1Q13601 381 aaKnown RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 ZNF362Q5T0B9 420 aaPredicted RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 LCN1P1Q5VSP4 162 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 XAF1Q6GPH4 301 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 PLBD1Q6P4A8 553 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 BORAQ6PGQ7 559 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 CCDC81Q6ZN84 652 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 IGFN1Q86VF2 1251 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 JAZF1Q86VZ6 243 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 CPOQ8IVL8 374 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 SULF2Q8IWU5 870 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 ZFP62Q8NB50 900 aaPredicted RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 FAM98AQ8NCA5 519 aaKnown RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 SLC37A3Q8NCC5 494 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 MUL1Q969V5 352 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 TMEM80Q96HE8 168 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 OR5B2Q96R09 309 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 JAM3Q9BX67 310 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 TTTY12Q9BZ98 90 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 AMBNQ9NP70 447 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 PLA2G3Q9NZ20 509 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 GRHPRQ9UBQ7 328 aa13.8□□□□□ -0.2
CLN6-219ENST00000637329 DIMT1Q9UNQ2 313 aaKnown RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 RPH3AQ9Y2J0 694 aaPredicted RBP13.8□□□□□ -0.2
CLN6-219ENST00000637329 ACACAQ13085 2346 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 TEX13CA0A0J9YWL9 993 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 A0A1W2PRG6 482 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 PINLYPA6NC86 204 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 RNF13O43567 381 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 EIF1BO60739 113 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 RAB36O95755 333 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 RFPL3SP0C7P2 107 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 PLA2G2AP14555 144 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 SLC2A5P22732 501 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 DAP3P51398 398 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 CCL11P51671 97 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 RPL27P61353 136 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 SLC35A1P78382 337 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 LGALS3BPQ08380 585 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 POU4F2Q12837 409 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 IRF3Q14653 427 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 TOMM20Q15388 145 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 ZNF766Q5HY98 468 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 SLC35D3Q5M8T2 416 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 TMPPEQ6ZT21 453 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 ASB18Q6ZVZ8 466 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 MEPCEQ7L2J0 689 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 HDDC2Q7Z4H3 204 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 BCDIN3DQ7Z5W3 292 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 SATL1Q86VE3 508 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 SDR9C7Q8NEX9 313 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 OR52E2Q8NGJ4 325 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 OR5M1Q8NGP8 315 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 TM9SF4Q92544 642 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 RNFT2Q96EX2 444 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 KLHL15Q96M94 604 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 TSPAN32Q96QS1 320 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 SMAD5Q99717 465 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 NMNAT2Q9BZQ4 307 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■□□ 15
CLN6-219ENST00000637329 TXNIPQ9H3M7 391 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 FGF20Q9NP95 211 aaPredicted RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 ACOT13Q9NPJ3 140 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 KLHL1Q9NR64 748 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 HAO2Q9NYQ3 351 aa13.79□□□□□ -0.2
CLN6-219ENST00000637329 PCDHGA9Q9Y5G4 932 aaKnown RBP13.79□□□□□ -0.2
CLN6-219ENST00000637329 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 AQP7P3A6NL99 342 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 J3QKU1 62 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 ACOT7O00154 380 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 FADS2O95864 444 aaKnown RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 F13BP05160 661 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 STSP08842 583 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 TCEA1P23193 301 aaKnown RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 DCKP27707 260 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 SFTPDP35247 375 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 DIO1P49895 249 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 MEOX1P50221 254 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 SLC25A1P53007 311 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 GFRA1P56159 465 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 FOXK1P85037 733 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 EMX1Q04741 257 aaPredicted RBP13.78□□□□□ -0.2
CLN6-219ENST00000637329 PIGFQ07326 219 aa13.78□□□□□ -0.2
CLN6-219ENST00000637329 NEDD8Q15843 81 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms