RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 DNASE1L1P49184 302 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 AGTR2P50052 363 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CAV2P51636 162 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CHN2P52757 468 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 DLX5P56178 289 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CLDN15P56746 228 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CDC42P60953 191 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 UBE2MP61081 183 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 RAP1BP61224 184 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 SNRPEP62304 92 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 ERVK-8P63133 956 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 HMGCS1Q01581 520 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OC90Q02509 493 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 PAX2Q02962 417 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 SLC18A2Q05940 514 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TRAF3Q13114 568 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ASAH1Q13510 395 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ITGA9Q13797 1035 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CTTNQ14247 550 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 SF3A2Q15428 464 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 GABRA6Q16445 453 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CDKN3Q16667 212 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 RFTN2Q52LD8 501 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 ARMCX4Q5H9R4 360 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TPRG1LQ5T0D9 272 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OGFRL1Q5TC84 451 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 RESP18Q5W5W9 173 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TMEM42Q69YG0 159 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ACSM5Q6NUN0 579 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ZNF474Q6S9Z5 364 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 FAM131AQ6UXB0 335 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.68□□□□□ -1.982e-10■■■■■ 46.2
VIM-210ENST00000637053 PQLC2Q6ZP29 291 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 LINC00336Q6ZUF6 198 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TMPRSS11FQ6ZWK6 438 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 MON1BQ7L1V2 547 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 SSX6Q7RTT6 188 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ANKRD33Q7Z3H0 272 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR2W3Q7Z3T1 314 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FAM220AQ7Z4H9 259 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 GOLGA7Q7Z5G4 137 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 WDR53Q7Z5U6 358 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 CLEC14AQ86T13 490 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 THOC6Q86W42 341 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 ANGPTL5Q86XS5 388 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 SYT12Q8IV01 421 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 C16orf71Q8IYS4 520 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 IZUMO1Q8IYV9 350 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 RNF113BQ8IZP6 322 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 LGI2Q8N0V4 545 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR6V1Q8N148 313 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CLDN19Q8N6F1 224 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 Q8N9G6 341 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 NFAM1Q8NET5 270 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 ATP6V1C2Q8NEY4 427 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR11H1Q8NG94 326 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR9Q2Q8NGE9 314 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR8J3Q8NGG0 315 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR56A4Q8NGH8 313 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR52I1Q8NGK6 324 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR13D1Q8NGV5 346 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR10K1Q8NGX5 313 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR14K1Q8NGZ2 314 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 OR11H2Q8NH07 326 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 COQ8AQ8NI60 647 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FNDC8Q8TC99 324 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 BAALCQ8WXS3 180 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 C11orf40Q8WZ69 217 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 HIST1H2ACQ93077 130 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 C12orf43Q96C57 262 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 DCPSQ96C86 337 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 CTHRC1Q96CG8 243 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FLYWCH2Q96CP2 140 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 CXorf40BQ96DE9 158 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 L3HYPDHQ96EM0 354 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ZC3HAV1LQ96H79 300 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 MS4A14Q96JA4 679 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 CXorf58Q96LI9 332 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ZNF512Q96ME7 567 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 Q96MT0 163 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 DCLRE1CQ96SD1 692 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 TIMP4Q99727 224 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ZSWIM1Q9BR11 485 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TCEAL7Q9BRU2 100 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 FUNDC2Q9BWH2 189 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 TLNRD1Q9H1K6 362 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 BOLA2Q9H3K6 86 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 MFSD1Q9H3U5 465 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 DHX35Q9H5Z1 703 aaKnown RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 NT5DC2Q9H857 520 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 SEBOXQ9HB31 216 aaPredicted RBP2.68□□□□□ -1.98
VIM-210ENST00000637053 MSL2Q9HCI7 577 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 C6orf50Q9HD87 102 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ISYNA1Q9NPH2 558 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 IL17RBQ9NRM6 502 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 MIOXQ9UGB7 285 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 ZNF391Q9UJN7 358 aa2.68□□□□□ -1.98
VIM-210ENST00000637053 RAP2CQ9Y3L5 183 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms