RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 DPF1Q92782 380 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HAS2Q92819 552 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CDS1Q92903 461 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 KHSRPQ92945 711 aaKnown RBP eCLIP1.77□□□□□ -2.13
TCF4-264ENST00000628391 EXT2Q93063 718 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HIST1H2BHQ93079 126 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 UBE2FQ969M7 185 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ISOC2Q96AB3 205 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 COA7Q96BR5 231 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF707Q96C28 371 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 BPIFA2Q96DR5 249 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ARSGQ96EG1 525 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 PHF21BQ96EK2 531 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 C1GALT1C1Q96EU7 318 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RNFT2Q96EX2 444 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 PIK3IP1Q96FE7 263 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CPNE2Q96FN4 548 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 PGAM5Q96HS1 289 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RCC1LQ96I51 464 aaKnown RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 KIRREL1Q96J84 757 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SAMD8Q96LT4 415 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF75AQ96N20 296 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLC6A18Q96N87 628 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ALKBH3Q96Q83 286 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 OR5B2Q96R09 309 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 DIRC2Q96SL1 478 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZIC5Q96T25 663 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RNF2Q99496 336 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HIST1H2BNQ99877 126 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HIST1H2BMQ99879 126 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HIST1H2BLQ99880 126 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SYT3Q9BQG1 590 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SULT4A1Q9BR01 284 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ARHGAP9Q9BRR9 750 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLC35A5Q9BS91 424 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 C11orf84Q9BUA3 381 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 TSSK6Q9BXA6 273 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 MAGEB5Q9BZ81 275 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 NIF3L1Q9GZT8 377 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLITRK2Q9H156 845 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 POLR3FQ9H1D9 316 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 ATG5Q9H1Y0 275 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 OR10A4Q9H209 315 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ATXN3LQ9H3M9 355 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SRMSQ9H3Y6 488 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RGCCQ9H4X1 137 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ACTL8Q9H568 366 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZBTB3Q9H5J0 574 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 IKZF5Q9H5V7 419 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 TMEM231Q9H6L2 316 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 GREM2Q9H772 168 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 TMEM185BQ9H7F4 350 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 AUNIPQ9H7T9 357 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF430Q9H8G1 570 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 RHOFQ9HBH0 211 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ADGRL4Q9HBW9 690 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CSNK1G1Q9HCP0 422 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 HRASLSQ9HDD0 168 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 AMBNQ9NP70 447 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 MKKSQ9NPJ1 570 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 MEPEQ9NQ76 525 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF302Q9NR11 478 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLC2A9Q9NRM0 540 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 THSD1Q9NS62 852 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CUTCQ9NTM9 273 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RYDENQ9NUL5 291 aaKnown RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 TDP1Q9NUW8 608 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SOHLH2Q9NX45 425 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CLEC5AQ9NY25 188 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ASIC5Q9NY37 505 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLC25A37Q9NYZ2 338 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 COMMD9Q9P000 198 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 IL17CQ9P0M4 197 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLAMF8Q9P0V8 285 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ABRACLQ9P1F3 81 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SEMA5BQ9P283 1151 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF219Q9P2Y4 722 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 MYOTQ9UBF9 498 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 LPAR3Q9UBY5 353 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ZNF282Q9UDV7 671 aaPredicted RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 SMPXQ9UHP9 88 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 NAGKQ9UJ70 344 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 KCNG2Q9UJ96 466 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 ADAM29Q9UKF5 820 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 PITPNC1Q9UKF7 332 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 PCDHB8Q9UN66 801 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 FLVCR2Q9UPI3 526 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 LHX6Q9UPM6 363 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CORO2BQ9UQ03 480 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CAMK2AQ9UQM7 478 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 OSGIN2Q9Y236 505 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RCE1Q9Y256 329 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 SLC5A6Q9Y289 635 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 FNDC3AQ9Y2H6 1198 aaKnown RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 MRPS2Q9Y399 296 aaKnown RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 HDGFL3Q9Y3E1 203 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 RBM7Q9Y580 266 aaKnown RBP1.77□□□□□ -2.13
TCF4-264ENST00000628391 NME7Q9Y5B8 376 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 CLDN16Q9Y5I7 305 aa1.77□□□□□ -2.13
TCF4-264ENST00000628391 WIF1Q9Y5W5 379 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms