RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ITGA5P08648 1049 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 NCK1P16333 377 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 PTNP21246 168 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 FOXG1P55316 489 aaPredicted RBP14.73□□□□□ -0.05
UBE3D-208ENST00000626828 MXRA7P84157 204 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 SLC25A3Q00325 362 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 PUDPQ08623 228 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 ZP4Q12836 540 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 KEAP1Q14145 624 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 ZNF74Q16587 644 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 IFI44LQ53G44 452 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 SAMD4BQ5PRF9 694 aaKnown RBP14.73□□□□□ -0.05
UBE3D-208ENST00000626828 VTCN1Q7Z7D3 282 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 NKAIN4Q8IVV8 208 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 C1orf162Q8NEQ5 155 aaPredicted RBP14.73□□□□□ -0.05
UBE3D-208ENST00000626828 GEMIN6Q8WXD5 167 aaKnown RBP14.73□□□□□ -0.05
UBE3D-208ENST00000626828 AMBRA1Q9C0C7 1298 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 EGFL7Q9UHF1 273 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 ZNF229Q9UJW7 825 aa14.73□□□□□ -0.05
UBE3D-208ENST00000626828 ZNF587BE7ETH6 402 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 HPRP00739 348 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 ADORA3P0DMS8 318 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 HSD17B1P14061 328 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 AHCYP23526 432 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 ACKR1Q16570 336 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 SPATS1Q496A3 300 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 NCMAPQ5T1S8 102 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 C9orf135Q5VTT2 229 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 PAMR1Q6UXH9 720 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 NHLRC1Q6VVB1 395 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 C17orf78Q8N4C9 275 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 RNF148Q8N7C7 305 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 ANKK1Q8NFD2 765 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 TMEM239Q8WW34 195 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 BOD1Q96IK1 185 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 PRRC1Q96M27 445 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 HS3ST6Q96QI5 342 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 TMEM204Q9BSN7 226 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 FNDC11Q9BVV2 318 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 GORASP2Q9H8Y8 452 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 MEPEQ9NQ76 525 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-208ENST00000626828 CCM2LQ9NUG4 571 aaPredicted RBP14.72□□□□□ -0.05
UBE3D-208ENST00000626828 DCAF13Q9NV06 445 aaKnown RBP14.72□□□□□ -0.05
UBE3D-208ENST00000626828 CD300AQ9UGN4 299 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 A4GNTQ9UNA3 340 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 PLEKHA6Q9Y2H5 1048 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 MED31Q9Y3C7 131 aa14.72□□□□□ -0.05
UBE3D-208ENST00000626828 ZNF726A6NNF4 738 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 B2RBV5 119 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 RPL36A-HNRNPH2H7BZ11 118 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 KPNA4O00629 521 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-208ENST00000626828 TRAF3IP2O43734 574 aaPredicted RBP14.71□□□□□ -0.05
UBE3D-208ENST00000626828 UPK3AO75631 287 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 CD3EP07766 207 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 HLA-DOBP13765 273 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 FUT1P19526 365 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 HMBOX1Q6NT76 420 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 GPR137CQ8N3F9 429 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 PIK3C3Q8NEB9 887 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 TMEM255BQ8WV15 326 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 MBD6Q96DN6 1003 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SGTBQ96EQ0 304 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 HSH2DQ96JZ2 352 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 LRR1Q96L50 414 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SLC17A5Q9NRA2 495 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 TAS2R5Q9NYW4 299 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SAMD4AQ9UPU9 718 aaKnown RBP14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SNX13Q9Y5W8 968 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SLC25A15Q9Y619 301 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 CSMD1Q96PZ7 3565 aa14.71□□□□□ -0.05
UBE3D-208ENST00000626828 SLC35F4A4IF30 521 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 DPRXA6NFQ7 191 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 ATE1O95260 518 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 ASAH2BP0C7U1 165 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 UMPSP11172 480 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 HOXB1P14653 301 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 CDH2P19022 906 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 TCN1P20061 433 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 PAX7P23759 505 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 YAP1P46937 504 aaKnown RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 PRPS1P60891 318 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 POU3F1Q03052 451 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 FOXD4Q12950 439 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 TRAM2Q15035 370 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 FXNQ16595 210 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 KLHL17Q6TDP4 642 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 ZNF704Q6ZNC4 412 aaPredicted RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 CYP4Z1Q86W10 505 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 DEFB107AQ8IZN7 70 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 LRRC17Q8N6Y2 441 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 WDR31Q8NA23 367 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 OR52N5Q8NH56 324 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 LIPHQ8WWY8 451 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 TXNDC15Q96J42 360 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 OR2M2Q96R28 347 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 FOXC2Q99958 501 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 AMDHD2Q9Y303 409 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 FAM32AQ9Y421 112 aaKnown RBP14.7□□□□□ -0.06
UBE3D-208ENST00000626828 PLCE1Q9P212 2302 aa14.7□□□□□ -0.06
UBE3D-208ENST00000626828 C11orf98E9PRG8 122 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms