RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 AP3B1O00203 1094 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 CT62P0C5K7 136 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 UBTFL1P0CB47 393 aaPredicted RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 PRDX3P30048 256 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 FDFT1P37268 417 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 VHLP40337 213 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 YAP1P46937 504 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 WNT4P56705 351 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 ACVR1Q04771 509 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 CKAP4Q07065 602 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 BST2Q10589 180 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 NRF1Q16656 503 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 CCDC183Q5T5S1 534 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 SLC25A48Q6ZT89 311 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 FAM228AQ86W67 206 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 PAQR7Q86WK9 346 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 NECAB1Q8N987 351 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 FNDC5Q8NAU1 212 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 OR4F6Q8NGB9 312 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 ACOT11Q8WXI4 607 aaPredicted RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 MYDGFQ969H8 173 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 TPD52L3Q96J77 140 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 MS4A4EQ96PG1 132 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 MBOAT4Q96T53 435 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 RIOK1Q9BRS2 568 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 RIOK2Q9BVS4 552 aaKnown RBP2.77□□□□□ -1.97
CDR1-202ENST00000625883 DEFB127Q9H1M4 99 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 CCL28Q9NRJ3 127 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 ETNK2Q9NVF9 386 aa2.77□□□□□ -1.97
CDR1-202ENST00000625883 PHF3Q92576 2039 aaKnown RBP2.76□□□□□ -1.97
CDR1-202ENST00000625883 ZNF716A6NP11 495 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 NDUFB10O96000 172 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 MOSP00540 346 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 CST1P01037 141 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 ZNF735P0CB33 412 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 ICAM2P13598 275 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 ZNF17P17021 662 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 KITLGP21583 273 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 CMA1P23946 247 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 CCNE1P24864 410 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 FMO3P31513 532 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 HNRNPH3P31942 346 aaKnown RBP2.76□□□□□ -1.97
CDR1-202ENST00000625883 CRYBB2P43320 205 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 PLP1P60201 277 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 IRX3P78415 501 aaPredicted RBP2.76□□□□□ -1.97
CDR1-202ENST00000625883 PDIA2Q13087 525 aaKnown RBP2.76□□□□□ -1.97
CDR1-202ENST00000625883 CYTH1Q15438 398 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 KDM7AQ6ZMT4 941 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 ACP7Q6ZNF0 438 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 TAS2R42Q7RTR8 314 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 TMEM61Q8N0U2 210 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 RDH5Q92781 318 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 SMARCD2Q92925 531 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 OR8B4Q96RC9 309 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 RASL11BQ9BPW5 248 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 NRIP2Q9BQI9 281 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 OR11A1Q9GZK7 315 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 GBA3Q9H227 469 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 SRMSQ9H3Y6 488 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 SIAEQ9HAT2 523 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 IL26Q9NPH9 171 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 ADAM22Q9P0K1 906 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 RPS6KB2Q9UBS0 482 aa2.76□□□□□ -1.97
CDR1-202ENST00000625883 GJE1A6NN92 205 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 KRTAP9-6A8MVA2 160 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 TNFSF13O75888 250 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 IGHV2-5P01817 119 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 FGF1P05230 155 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 CASP14P31944 242 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 NPBWR2P48146 333 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 SUCLG1P53597 346 aaKnown RBP2.75□□□□□ -1.97
CDR1-202ENST00000625883 ATP5IP56385 69 aaPredicted RBP2.75□□□□□ -1.97
CDR1-202ENST00000625883 ENPEPQ07075 957 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 C2orf83Q53S99 150 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 TRIM40Q6P9F5 258 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 NANOGNBQ7Z5D8 188 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 PLA2G4DQ86XP0 818 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 SLC2A14Q8TDB8 520 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 ELSPBP1Q96BH3 223 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 IFT74Q96LB3 600 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 PELOQ9BRX2 385 aaKnown RBP2.75□□□□□ -1.97
CDR1-202ENST00000625883 PKIBQ9C010 78 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 ROGDIQ9GZN7 287 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 TM9SF3Q9HD45 589 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 ADAP2Q9NPF8 381 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 NMRK1Q9NWW6 199 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 KLHL28Q9NXS3 571 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 CALYQ9NYX4 217 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 NYAP2Q9P242 653 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 IKZF2Q9UKS7 526 aa2.75□□□□□ -1.97
CDR1-202ENST00000625883 CSDC2Q9Y534 153 aaKnown RBP2.75□□□□□ -1.97
CDR1-202ENST00000625883 CDHR2Q9BYE9 1310 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 FANCIQ9NVI1 1328 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 WI2-2373I1.2A0A1W2PRP0 233 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 CCDC182A6NF36 153 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 FAM47DPA6NHR8 397 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 CCDC169A6NNP5 214 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 INSP01308 110 aa2.74□□□□□ -1.97
CDR1-202ENST00000625883 CRYGBP07316 175 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms