RNA–Protein interactions for RNA: ENST00000623242.3

ATRX-209, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-209ENST00000623242 PDXPQ96GD0 296 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 ART5Q96L15 291 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 CEP19Q96LK0 163 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 DACH2Q96NX9 599 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 DDOQ99489 341 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 C17orf62Q9BQA9 187 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 TMEM204Q9BSN7 226 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 WACQ9BTA9 647 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 CSTL1Q9H114 145 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 DDX31Q9H8H2 851 aaKnown RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 MTHFD2LQ9H903 347 aaPredicted RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 CXorf21Q9HAI6 301 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 TMEM27Q9HBJ8 222 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 FGF22Q9HCT0 170 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 HMG20AQ9NP66 347 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 SLC35C2Q9NQQ7 365 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 ZCCHC3Q9NUD5 404 aaKnown RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 FAM118AQ9NWS6 357 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 HRASLS2Q9NWW9 162 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 AKAP7Q9P0M2 348 aaPredicted RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 KLHL9Q9P2J3 617 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 SEC14L4Q9UDX3 406 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 GIMAP2Q9UG22 337 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 TEKT2Q9UIF3 430 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 PILRBQ9UKJ0 227 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 SLC17A4Q9Y2C5 497 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 PADI2Q9Y2J8 665 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 SH3GLB1Q9Y371 365 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 RPL36Q9Y3U8 105 aaKnown RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 PCDHGB1Q9Y5G3 927 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 MAGED1Q9Y5V3 778 aaPredicted RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 U3KQV3 271 aa3.7□□□□□ -1.82
ATRX-209ENST00000623242 MUC22E2RYF6 1773 aaPredicted RBP3.7□□□□□ -1.82
ATRX-209ENST00000623242 ATG2BQ96BY7 2078 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 KCNE1BA0A087WTH5 132 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 A0A0J9YY10 115 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 HTR3EA5X5Y0 456 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 LRIT2A6NDA9 550 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 C9JVG2 144 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 J3QR06 171 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 hCG_2039718K7EN88 272 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 PDLIM1O00151 329 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 HS3ST1O14792 307 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 SLC22A1O15245 554 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 YKT6O15498 198 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 AQP9O43315 295 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 PLOD3O60568 738 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ZBTB11O95625 1053 aaPredicted RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 SOD1P00441 154 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 IFNGP01579 166 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 APOA1P02647 267 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 H1F0P07305 194 aaKnown RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 ETS2P15036 469 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ZNF26P17031 533 aaPredicted RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 HIST1H1TP22492 207 aaPredicted RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 AK4P27144 223 aaPredicted RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 PKLRP30613 574 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 CA5AP35218 305 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 IDH2P48735 452 aaKnown RBP3.69□□□□□ -1.82
ATRX-209ENST00000623242 INPP1P49441 399 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 HLCSP50747 726 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 SMSP52788 366 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 DEFA1P59665 94 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 DEFA3P59666 94 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ISL1P61371 349 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 REEP5Q00765 189 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 NPRL3Q12980 569 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 SERTAD2Q14140 314 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 FZD2Q14332 565 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 KIAA0040Q15053 153 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 SF3B4Q15427 424 aaKnown RBP eCLIP3.69□□□□□ -1.82
ATRX-209ENST00000623242 SLC5A12Q1EHB4 618 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 MICAQ29983 383 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 DEFB133Q30KQ1 61 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 HLA-BQ31612 363 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 IGSF11Q5DX21 431 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 NHSL2Q5HYW2 709 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ZNF311Q5JNZ3 666 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 TPRG1LQ5T0D9 272 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 NDUFAF5Q5TEU4 345 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 FAM71E1Q6IPT2 247 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 TCEAL6Q6IPX3 200 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ZNF544Q6NX49 715 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 UGT2A3Q6UWM9 527 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 TMEM64Q6YI46 380 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 KCTD8Q6ZWB6 473 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 RNF130Q86XS8 419 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 TMEM219Q86XT9 240 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 RIMKLAQ8IXN7 391 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 NAGSQ8N159 534 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 SLC22A18ASQ8N1D0 253 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 ZNF441Q8N8Z8 693 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 LMNTD1Q8N9Z9 388 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 PRSS33Q8NF86 280 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 KBTBD8Q8NFY9 601 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 OR2L3Q8NG85 312 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 OR4K1Q8NGD4 311 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 OR52E1Q8NGJ3 308 aa3.69□□□□□ -1.82
ATRX-209ENST00000623242 PIGXQ8TBF5 258 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms