RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 EREGO14944 169 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CSTAP01040 98 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OPN1MWP04001 364 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 LINC00614P0C842 121 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OPN1MW2P0DN77 364 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OPN1MW3P0DN78 364 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 NME2P22392 152 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 CD80P33681 288 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 EPHB3P54753 998 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 HNF4GQ14541 408 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 HMGN3Q15651 99 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 AWAT1Q58HT5 328 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 AKR1C8PQ5T2L2 129 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OR2A2Q6IF42 318 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GLT6D1Q7Z4J2 308 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 ANGPTL5Q86XS5 388 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 LRRC56Q8IYG6 542 aaPredicted RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 POGLUT1Q8NBL1 392 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 OR5W2Q8NH69 310 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 LGALS14Q8TCE9 139 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 TMED6Q8WW62 240 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 XAGE5Q8WWM1 108 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 RRNAD1Q96FB5 475 aaKnown RBP7.29□□□□□ -1.24
VPS11-209ENST00000622309 NRSN2Q9GZP1 204 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 GJD2Q9UKL4 321 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 MOKQ9UQ07 419 aa7.29□□□□□ -1.24
VPS11-209ENST00000622309 TRIP12Q14669 1992 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 GNG14A0A1W2PPG7 69 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 A0A1W2PPK0 400 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 A8MWP6 167 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 AGPAT2O15120 278 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CLDN11O75508 207 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TXNDC12O95881 172 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SMIM10L2AP0DMW4 78 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SMIM10L2BP0DMW5 78 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ELNP15502 786 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CASRP41180 1078 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CAV2P51636 162 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 RAP1AP62834 184 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 HTD2P86397 168 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CDK5Q00535 292 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 BDH1Q02338 343 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR7A5Q15622 319 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 DUSP28Q4G0W2 176 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TMEM35AQ53FP2 167 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 PSAPL1Q6NUJ1 521 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CLEC20AQ6ZU45 233 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SCD5Q86SK9 330 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ETFBKMTQ8IXQ9 262 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 BPIFB2Q8N4F0 458 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 BEND2Q8NDZ0 799 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ROBO4Q8WZ75 1007 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TBX5Q99593 518 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 RIOK2Q9BVS4 552 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 GPR62Q9BZJ7 368 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 KATNBL1Q9H079 304 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SEMA6CQ9H3T2 930 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 EXO5Q9H790 373 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ZNF230Q9UIE0 474 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 PPIL1Q9Y3C6 166 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OARD1Q9Y530 152 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 A0A0G2JMZ2 1700 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 A0A0U1RQK1 487 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ZNF320A2RRD8 509 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 MGAT4DA6NG13 374 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ZNF587BE7ETH6 402 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 MFNGO00587 321 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 IGHEP01854 428 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ARG1P05089 322 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SPARCP09486 303 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ST8SIA6P61647 398 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 EIF5AP63241 154 aaKnown RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 ACSM2AQ08AH3 577 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ACSM3Q53FZ2 586 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CLEC12AQ5QGZ9 265 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 NKAIN2Q5VXU1 208 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ACSM2BQ68CK6 577 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 LPCAT3Q6P1A2 487 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ENPP7Q6UWV6 458 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 PIANPQ8IYJ0 282 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR4E2Q8NGC2 313 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR52N2Q8NGI0 321 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 FCRL2Q96LA5 508 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 CITED1Q99966 193 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 TMEM208Q9BTX3 173 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 C20orf24Q9BUV8 137 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 DDA1Q9BW61 102 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 OR52A5Q9H2C5 316 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 STARD10Q9Y365 291 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SIRT4Q9Y6E7 314 aaPredicted RBP7.28□□□□□ -1.24
VPS11-209ENST00000622309 MEIS3P2A8K0S8 358 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 ACOT7O00154 380 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 SOCS6O14544 535 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 GMFGO60234 142 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 VNN2O95498 520 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 CH25HO95992 272 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 IL3P08700 152 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 NPSP0C0P6 89 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 FABP4P15090 132 aa7.28□□□□□ -1.24
VPS11-209ENST00000622309 FGF7P21781 194 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms