RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 LILRB4Q8NHJ6 448 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 C3orf49Q96BT1 292 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF583Q96ND8 569 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SORCS2Q96PQ0 1159 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC25A18Q9H1K4 315 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 NIPAL2Q9H841 368 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 GORASP2Q9H8Y8 452 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 INPP5EQ9NRR6 644 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 DCAF13Q9NV06 445 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 A0A1W2PQL4 384 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF736B4DX44 427 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 RAB3DO95716 219 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ARAFP10398 606 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ITGAMP11215 1152 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 APOBEC1P41238 236 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ALDH3B2P48448 385 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 RRAS2P62070 204 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF616Q08AN1 781 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 MRPL58Q14197 206 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 VRK3Q8IV63 474 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 LINC01465Q8N7H1 131 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 HSD17B8Q92506 261 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 CHST8Q9H2A9 424 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ANKRD19PQ9H560 264 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 OPA3Q9H6K4 179 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SIDT1Q9NXL6 827 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 MOKQ9UQ07 419 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 METTL15A6NJ78 407 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 OR6C76A6NM76 312 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 H0YIG0 161 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 GLCEO94923 617 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 GRPP07492 148 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ST6GAL1P15907 406 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 AGTR1P30556 359 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 RAB40BQ12829 278 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF750Q32MQ0 723 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC16A9Q7RTY1 509 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 C1orf87Q8N0U7 546 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 FAM83FQ8NEG4 500 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 EIF5A2Q9GZV4 153 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 MGAT4CQ9UBM8 478 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 ATG4BQ9Y4P1 393 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 H7C1C5 153 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 M0R1B8 84 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 PRKRAO75569 313 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 TPPPO94811 219 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 LCN6P62502 163 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SIGLEC14Q08ET2 396 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 TRA2AQ13595 282 aaKnown RBP eCLIP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 P2RY14Q15391 338 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 C1orf140Q5VVS0 124 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SFRP4Q6FHJ7 346 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 MORN4Q8NDC4 146 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 OR13F1Q8NGS4 319 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 UBTD2Q8WUN7 234 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 SDSLQ96GA7 329 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 WSB2Q9NYS7 404 aaPredicted RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 LSM5Q9Y4Y9 91 aaKnown RBP9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 GPR45Q9Y5Y3 372 aa9.04□□□□□ -0.96
CLTCL1-211ENST00000621271 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OR6C65A6NJZ3 312 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 PPP6CO00743 305 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 LYRM1O43325 122 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 TOXO94900 526 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OPRD1P41143 372 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 AGFG1P52594 562 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 RPL23AP62750 156 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 FAM69AQ5T7M9 428 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF691Q5VV52 312 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 H1FNTQ75WM6 255 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 NDUFAF7Q7L592 441 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SPRED1Q7Z699 444 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 BTLAQ7Z6A9 289 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OR6F1Q8NGZ6 308 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 BAHD1Q8TBE0 780 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 MUL1Q969V5 352 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 C4orf36Q96KX1 117 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 TAS2R3Q9NYW6 316 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SPINT2O43291 252 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 DOK2O60496 412 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SMIM18P0DKX4 95 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 P2RX1P51575 399 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 TAS2R20P59543 309 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CYCSP99999 105 aaKnown RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 LAIR1Q6GTX8 287 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 GLB1L2Q8IW92 636 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SULF2Q8IWU5 870 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC35F3Q8IY50 421 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 FRMD1Q8N878 549 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 L3MBTL4Q8NA19 623 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 GJC3Q8NFK1 279 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OR5M1Q8NGP8 315 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 ABHD4Q8TB40 342 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 LIPHQ8WWY8 451 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 TM4SF18Q96CE8 201 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF582Q96NG8 517 aaPredicted RBP9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OR5B12Q96R08 314 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 SNX18Q96RF0 628 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 OCSTAMPQ9BR26 566 aa9.03□□□□□ -0.96
CLTCL1-211ENST00000621271 CACNG6Q9BXT2 260 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms