RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PAPOLBQ9NRJ5 636 aaKnown RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 FAM118AQ9NWS6 357 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 ENOPH1Q9UHY7 261 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 MGAT4BQ9UQ53 548 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 CGAP01215 116 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 UBTFL6P0CB48 400 aaPredicted RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 CD8BP10966 210 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 UBL4AP11441 157 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 MYF6P23409 242 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 SFTPDP35247 375 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 UGT2B15P54855 530 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 OR1Q1Q15612 314 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 CD226Q15762 336 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 PLPPR5Q32ZL2 321 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 HBMQ6B0K9 141 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 ZNF613Q6PF04 617 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 USP51Q70EK9 711 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 GTPBP8Q8N3Z3 284 aaPredicted RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 ATP6V1C2Q8NEY4 427 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 OR2V1Q8NHB1 315 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 NIPSNAP1Q9BPW8 284 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 KLHDC3Q9BQ90 382 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 GABARAPL3Q9BY60 117 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 TRIM2Q9C040 744 aa14.36□□□□□ -0.11
CD40-207ENST00000620709 EXOSC3Q9NQT5 275 aaKnown RBP14.36□□□□□ -0.11
CD40-207ENST00000620709 SLC16A6O15403 523 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 SIAH2O43255 324 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 GNAO1P09471 354 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 CCKARP32238 428 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 IFNGR2P38484 337 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 ACAA2P42765 397 aaKnown RBP14.35□□□□□ -0.11
CD40-207ENST00000620709 NKX6-1P78426 367 aaPredicted RBP14.35□□□□□ -0.11
CD40-207ENST00000620709 PDSS1Q5T2R2 415 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 ALKBH2Q6NS38 261 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 MISPQ8IVT2 679 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 OR4K5Q8NGD3 323 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
CD40-207ENST00000620709 C12orf49Q9H741 205 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 BEX4Q9NWD9 120 aaPredicted RBP14.35□□□□□ -0.11
CD40-207ENST00000620709 SLC7A7Q9UM01 511 aa14.35□□□□□ -0.11
CD40-207ENST00000620709 A0A0J9YW62 118 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 LOC100130705A0A1B0GUX0 176 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 DEFB108AA8MXU0 73 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 GTPBP1O00178 669 aaKnown RBP14.34□□□□□ -0.11
CD40-207ENST00000620709 ZNF264O43296 627 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 GASTP01350 101 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 IL11P20809 199 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 CRYGSP22914 178 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 RPS6KA3P51812 740 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 CHN2P52757 468 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 RAC1P63000 192 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 ZNF117Q03924 483 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 IL18R1Q13478 541 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 NDUFAF6Q330K2 333 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 PGBD2Q6P3X8 592 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 ZNF730Q6ZMV8 503 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 RRM2BQ7LG56 351 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 P3H2Q8IVL5 708 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 PARP8Q8N3A8 854 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 LSMEM1Q8N8F7 131 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 OR6K3Q8NGY3 331 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 POC1BQ8TC44 478 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 ROBO4Q8WZ75 1007 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 GTPBP3Q969Y2 492 aaKnown RBP14.34□□□□□ -0.11
CD40-207ENST00000620709 GMPPAQ96IJ6 420 aaPredicted RBP14.34□□□□□ -0.11
CD40-207ENST00000620709 DGCR6LQ9BY27 220 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 PAQR5Q9NXK6 330 aaPredicted RBP14.34□□□□□ -0.11
CD40-207ENST00000620709 UBAP1Q9NZ09 502 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 CARD8Q9Y2G2 431 aa14.34□□□□□ -0.11
CD40-207ENST00000620709 A0A087WUU8 490 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 A0A0B4J2E0 115 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 A0A1B0GX12 115 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 MAGEA13PA6NCF6 341 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 OIP5O43482 229 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 SMPD2O60906 423 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 CLIC3O95833 236 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 THY1P04216 161 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 CARD18P57730 90 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 FOXF1Q12946 379 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 NPRL3Q12980 569 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 SKP2Q13309 424 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 GUSBP1Q15486 140 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 CTU2Q2VPK5 515 aaKnown RBP14.33□□□□□ -0.12
CD40-207ENST00000620709 UGT2A3Q6UWM9 527 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 ESPNLQ6ZVH7 1005 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 NKAIN4Q8IVV8 208 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 C8orf59Q8N0T1 100 aaPredicted RBP14.33□□□□□ -0.12
CD40-207ENST00000620709 TMCO5AQ8N6Q1 288 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 OSTF1Q92882 214 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 KLHL15Q96M94 604 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 GRIP2Q9C0E4 1043 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 LAT2Q9GZY6 243 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 KRCC1Q9NPI7 259 aaPredicted RBP14.33□□□□□ -0.12
CD40-207ENST00000620709 RPS6KB2Q9UBS0 482 aa14.33□□□□□ -0.12
CD40-207ENST00000620709 A0A1B0GWA3 101 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 CHP2O43745 196 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 ADAM11O75078 769 aa14.32□□□□□ -0.12
CD40-207ENST00000620709 SS18L1O75177 396 aaPredicted RBP14.32□□□□□ -0.12
CD40-207ENST00000620709 POLR2IP36954 125 aaKnown RBP14.32□□□□□ -0.12
CD40-207ENST00000620709 CCR4P51679 360 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms