RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 CEBPZOSA8MTT3 80 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SELENOFO60613 162 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GPR32O75388 356 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GPR143P51810 404 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RAP1BP61224 184 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 KCNJ10P78508 379 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ARHGAP1Q07960 439 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SURF2Q15527 256 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 KCTD11Q693B1 232 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 NPAS4Q8IUM7 802 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 POC1BQ8TC44 478 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CD200R1Q8TD46 325 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 FIZ1Q96SL8 496 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 NTPCRQ9BSD7 190 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 DIRAS3O95661 229 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CD3DP04234 171 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 F2RL1P55085 397 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SERPINA11Q86U17 422 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 EXOSC3Q9NQT5 275 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GJB5O95377 273 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 HOXD4P09016 255 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 BPIP17213 487 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PGGHGQ32M88 737 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CD300LGQ6UXG3 332 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CBLL1Q75N03 491 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PACRGQ96M98 296 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GDF2Q9UK05 429 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 GABRQQ9UN88 632 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TPRP12270 2363 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PIM1P11309 404 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 IAH1Q2TAA2 248 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PRAMEF14Q5SWL7 426 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 FAM212BQ9NTI7 297 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ICKQ9UPZ9 632 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 KCNK6Q9Y257 313 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 HCRTR2O43614 444 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MPC2O95563 127 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MAKP20794 623 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 IL12BP29460 328 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF140P52738 457 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 OR7E24Q6IFN5 339 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 USP50Q70EL3 339 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LAS2Q8IYD9 372 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF440Q8IYI8 595 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 OR4K15Q8NH41 348 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 BCL2L11O43521 198 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 AGFG1P52594 562 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LBX1P52954 281 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ATP1B3P54709 279 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RPS18P62269 152 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 AMZ1Q400G9 498 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PKDCCQ504Y2 493 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 DACT2Q5SW24 774 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ACSM5Q6NUN0 579 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MAMSTRQ6ZN01 415 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LRRC52Q8N7C0 313 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ACER3Q9NUN7 267 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TRDV1A0A1B0GX56 115 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ST8SIA5O15466 376 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 EDIL3O43854 480 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 DNAJB6O75190 326 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ADH1BP00325 375 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CASRP41180 1078 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MRPS6P82932 125 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TSPAN31Q12999 210 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 Q6ZSR9 355 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PLPP7Q8NBV4 271 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ARRDC4Q8NCT1 418 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 OR1S1Q8NH92 325 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CMBLQ96DG6 245 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ELOVL3Q9HB03 270 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 HHATLQ9HCP6 504 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SDCBPO00560 298 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 FUT1P19526 365 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RAB5AP20339 215 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CLCNKAP51800 687 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SLC22A25Q6T423 547 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF429Q86V71 674 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF611Q8N823 705 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 RHEBL1Q8TAI7 183 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 DERL3Q96Q80 235 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SOHLH2Q9NX45 425 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SUMO1P63165 101 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 SLC16A10Q8TF71 515 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 NXF5Q9H1B4 397 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MVB12BQ9H7P6 319 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZDHHC3Q9NYG2 299 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 NXT1Q9UKK6 140 aaKnown RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 Q6ZRG5 221 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 TMPPEQ6ZT21 453 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 THNSL2Q86YJ6 484 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 C1orf87Q8N0U7 546 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 NUP43Q8NFH3 380 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ATOH1Q92858 354 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-214ENST00000620676 ZNF487B1APH4 448 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 PRSS23O95084 383 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 MTHFD2P13995 350 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 CPEP16870 476 aa4.67□□□□□ -1.66
VPS13D-214ENST00000620676 LIPJQ5W064 366 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms