RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 REG4Q9BYZ8 158 aa14.98□□□□□ -0.01
HMGN3-203ENST00000620514 FKRPQ9H9S5 495 aa14.98□□□□□ -0.01
HMGN3-203ENST00000620514 MOKQ9UQ07 419 aa14.98□□□□□ -0.01
HMGN3-203ENST00000620514 RCE1Q9Y256 329 aa14.98□□□□□ -0.01
HMGN3-203ENST00000620514 ALPK2Q86TB3 2170 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 SSX4O60224 188 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 SLC43A1O75387 559 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 HLA-DOBP13765 273 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 GZMMP51124 257 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 ARF1P84077 181 aaKnown RBP14.97□□□□□ -0.01
HMGN3-203ENST00000620514 NRF1Q16656 503 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 CGB2Q6NT52 195 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 RBM45Q8IUH3 476 aaKnown RBP14.97□□□□□ -0.01
HMGN3-203ENST00000620514 WDFY1Q8IWB7 410 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 OR6T1Q8NGN1 323 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 ZNF837Q96EG3 531 aaPredicted RBP14.97□□□□□ -0.01
HMGN3-203ENST00000620514 SLC41A3Q96GZ6 507 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 OR2M2Q96R28 347 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 SEC61A2Q9H9S3 476 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 GPR35Q9HC97 309 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 OBP2BQ9NPH6 170 aa14.97□□□□□ -0.01
HMGN3-203ENST00000620514 CPSF4LA6NMK7 179 aaKnown RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 INAFM1C9JVW0 142 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 THY1P04216 161 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 NQO1P15559 274 aaKnown RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 CD247P20963 164 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 PCGF2P35227 344 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 UBE2NP61088 152 aaKnown RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 PHYHD1Q5SRE7 291 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 C1QTNF12Q5T7M4 302 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 CARD17Q5XLA6 110 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 NANOGP8Q6NSW7 305 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 ZNF544Q6NX49 715 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 ANKRD16Q6P6B7 361 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 WDR88Q6ZMY6 472 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 TSPYL5Q86VY4 417 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 TMEM123Q8N131 208 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 C10orf53Q8N6V4 93 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 ADPRHL1Q8NDY3 354 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 OR6S1Q8NH40 331 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 VANGL1Q8TAA9 524 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 TAMM41Q96BW9 452 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 ADAD1Q96M93 576 aaKnown RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 SLC38A2Q96QD8 506 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 EPYCQ99645 322 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 TMEM43Q9BTV4 400 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 EMC6Q9BV81 110 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 EVA1AQ9H8M9 152 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 NANOGQ9H9S0 305 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 BARX1Q9HBU1 254 aaPredicted RBP14.96□□□□□ -0.01
HMGN3-203ENST00000620514 FGFR1OP2Q9NVK5 253 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 ZNF446Q9NWS9 450 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 CORINQ9Y5Q5 1042 aa14.96□□□□□ -0.01
HMGN3-203ENST00000620514 HIVEP2P31629 2446 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 ARPC4-TTLL3A0A0A6YYG9 625 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 LOC102725191A0A1B0GVB3 256 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 RPL36A-HNRNPH2H7BZ11 118 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 FMO6PO60774 539 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 LYPD3O95274 346 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 C8BP07358 591 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 NUDT6P53370 316 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 CRYBA2P53672 197 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 PMS2P3Q13401 168 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 MFSD13AQ14CX5 517 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 CEACAM16Q2WEN9 425 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 TRMT5Q32P41 509 aaKnown RBP14.95□□□□□ -0.02
HMGN3-203ENST00000620514 RABL3Q5HYI8 236 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 ENTPD8Q5MY95 495 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 SWT1Q5T5J6 900 aaKnown RBP14.95□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF613Q6PF04 617 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 NHLRC1Q6VVB1 395 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 LINC00114Q6XXX2 140 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 PATL1Q86TB9 770 aaKnown RBP14.95□□□□□ -0.02
HMGN3-203ENST00000620514 UEVLDQ8IX04 471 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 GPR137CQ8N3F9 429 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 MAGEE2Q8TD90 523 aaPredicted RBP14.95□□□□□ -0.02
HMGN3-203ENST00000620514 TXNDC15Q96J42 360 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 ASPNQ9BXN1 380 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 CRLF2Q9HC73 371 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 MED29Q9NX70 200 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 CR1P17927 2039 aa14.95□□□□□ -0.02
HMGN3-203ENST00000620514 IGHV4-30-2A0A087WSY4 118 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 ZNF503-AS2A6NEH8 195 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 M0R3G1 203 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 FXYD1O00168 92 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 SEC14L2O76054 403 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 CELA3BP08861 270 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 CECR9P0C854 216 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 TROVE2P10155 538 aaKnown RBP eCLIP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 APOBEC3AP31941 199 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 ARFIP2P53365 341 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 SH3BGRP55822 239 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 POU3F1Q03052 451 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 KLF10Q13118 480 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 RAB35Q15286 201 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 VMACQ2NL98 169 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 MST1LQ2TV78 715 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 MYPOPQ86VE0 399 aaPredicted RBP14.94□□□□□ -0.02
HMGN3-203ENST00000620514 SLC30A8Q8IWU4 369 aa14.94□□□□□ -0.02
HMGN3-203ENST00000620514 SCAIQ8N9R8 606 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms