RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 BMP7P18075 431 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CD247P20963 164 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 FUT4P22083 530 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 DPP4P27487 766 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 AQP1P29972 269 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CEACAM8P31997 349 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 IFNA8P32881 189 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 POLR2IP36954 125 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ADH7P40394 386 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SUCLG1P53597 346 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GFRA1P56159 465 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 RPS3AP61247 264 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SNRPGP62308 76 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 KCNJ10P78508 379 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 HOXC5Q00444 222 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CRYZQ08257 329 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SCARB2Q14108 478 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CDSNQ15517 529 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CTU2Q2VPK5 515 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PLPPR5Q32ZL2 321 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 MRPL2Q5T653 305 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 C1orf185Q5T7R7 199 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PRAMEF8Q5VWM4 474 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PRAMEF7Q5VXH5 474 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SLX4IPQ5VYV7 408 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SP5Q6BEB4 398 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 RTL6Q6ICC9 239 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PLXDC2Q6UX71 529 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 C3P1Q6ZMU1 363 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PLEKHG7Q6ZR37 379 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SLC16A12Q6ZSM3 486 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SEM1Q6ZVN7 128 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CHMP1BQ7LBR1 199 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF367Q7RTV3 350 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ADGRE4PQ86SQ3 457 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CD163Q86VB7 1156 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 IGFN1Q86VF2 1251 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CMIPQ8IY22 773 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF614Q8N883 585 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF454Q8N9F8 522 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SCAIQ8N9R8 606 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR4K17Q8NGC6 315 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR4D11Q8NGI4 311 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR5M9Q8NGP3 310 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR9Q1Q8NGQ5 310 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 OR52P1PQ8NH57 321 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GPR119Q8TDV5 335 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GEMIN6Q8WXD5 167 aaKnown RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 WNT2BQ93097 391 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SLC35B4Q969S0 331 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 C1GALT1C1Q96EU7 318 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 WDYHV1Q96HA8 205 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 C7orf34Q96L11 122 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ALPK1Q96QP1 1244 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TIMP4Q99727 224 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PIP5K1AQ99755 562 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 COQ7Q99807 217 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TTYH2Q9BSA4 534 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 COPS4Q9BT78 406 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 SFXN3Q9BWM7 321 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PRR14Q9BWN1 585 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TEX12Q9BXU0 123 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 LAT2Q9GZY6 243 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 PIGMQ9H3S5 423 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 EXO5Q9H790 373 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 EVA1AQ9H8M9 152 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ISYNA1Q9NPH2 558 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TIGARQ9NQ88 270 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 FKBP14Q9NWM8 211 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 CLN6Q9NWW5 311 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TAS2R10Q9NYW0 307 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 P2RX2Q9UBL9 471 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 DAPK2Q9UIK4 370 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 TINAGQ9UJW2 476 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 MGAT4BQ9UQ53 548 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ANGPT4Q9Y264 503 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF443Q9Y2A4 671 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 RPH3AQ9Y2J0 694 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF175Q9Y473 711 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 GPC6Q9Y625 555 aaPredicted RBP4.72□□□□□ -1.65
SHMT1-211ENST00000618902 FREM1Q5H8C1 2179 aa4.72□□□□□ -1.65
SHMT1-211ENST00000618902 HIVEP1P15822 2718 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 ROS1P08922 2347 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 AKAP6Q13023 2319 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 A0A0G2JPF8 293 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 CDHR4A6H8M9 788 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MBD3L4A6NDZ8 208 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MBD3L3A6NE82 208 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MBD3L5A6NJ08 208 aaPredicted RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HNRNPCL2B2RXH8 293 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 HNRNPCL3B7ZW38 293 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 PRSS44E7EML9 344 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 GTPBP1O00178 669 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 EIF4E2O60573 245 aaKnown RBP4.71□□□□□ -1.66
SHMT1-211ENST00000618902 UPK1BO75841 260 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 SNAPC5O75971 98 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 INMTO95050 263 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 MFN2O95140 757 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 RCBTB2O95199 551 aa4.71□□□□□ -1.66
SHMT1-211ENST00000618902 LYPD3O95274 346 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms