RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 GLIS3Q8NEA6 775 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 CCDC74AQ96AQ1 378 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 ADAMTS6Q9UKP5 1117 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 A0A0B4J293 547 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 OR6C65A6NJZ3 312 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 SH2D1BO14796 132 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 BCL6P41182 706 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 GAB1Q13480 694 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 TANGO2Q6ICL3 276 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 AQP12AQ8IXF9 295 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 HAVCR2Q8TDQ0 301 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 SARGQ9BW04 601 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 ABCG5Q9H222 651 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 RBPJLQ9UBG7 517 aa11.76□□□□□ -0.53
TCF4-248ENST00000616053 KRBOX1C9JBD0 128 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 JRKO75564 520 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 PRKACAP17612 351 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 MMP12P39900 470 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 PCNPQ8WW12 178 aaKnown RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 LINC01599Q8WXQ3 324 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SLCO2A1Q92959 643 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 ALG8Q9BVK2 526 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 V9GYS6 101 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 UBE2L6O14933 153 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SLC29A1Q99808 456 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SELENOIQ9C0D9 397 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 GPR52Q9Y2T5 361 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SAMD9LQ8IVG5 1584 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SFTPCP11686 197 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 BMP5P22003 454 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 EIF1P41567 113 aaKnown RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 MFGE8Q08431 387 aaPredicted RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 TRMT10BQ6PF06 316 aaKnown RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 NOL4LQ96MY1 436 aaPredicted RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 ZNF337Q9Y3M9 751 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 KCTD3Q9Y597 815 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 VEZF1Q14119 521 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 TEX29Q8N6K0 151 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 OR7G3Q8NG95 312 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 ISOC1Q96CN7 298 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 MED17Q9NVC6 651 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 CSF1P09603 554 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 PVRP15151 417 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 C17orf67Q0P5P2 114 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 UNQ9370/PRO34162Q6UXP9 181 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 MISPQ8IVT2 679 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 BEST4Q8NFU0 473 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 OR1S2Q8NGQ3 325 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 TVP23CQ96ET8 276 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 SLCO2B1O94956 709 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 DHODHQ02127 395 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 RNFT1Q5M7Z0 435 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 PLPP5Q8NEB5 264 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 POMT1Q9Y6A1 747 aa11.75□□□□□ -0.53
TCF4-248ENST00000616053 ARHGEF17Q96PE2 2063 aaPredicted RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
TCF4-248ENST00000616053 OR7C2O60412 319 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 GPR18Q14330 331 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 ZNF404Q494X3 552 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PAQR8Q8TEZ7 354 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 F2RL2O00254 374 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 SLC22A2O15244 555 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FBP1P09467 338 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 AVPI1Q5T686 147 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 LRRC28Q86X40 367 aaPredicted RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 TAS2R16Q9NYV7 291 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 HBE1P02100 147 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 NR4A2P43354 598 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 MTNR1AP48039 350 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 GUCA2BQ16661 112 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
TCF4-248ENST00000616053 RPEQ96AT9 228 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PRDM14Q9GZV8 571 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 MS4A7Q9GZW8 240 aaPredicted RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 OTOFQ9HC10 1997 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 IGKV3-7A0A075B6H7 116 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PF4P02776 101 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 ATXN1LP0C7T5 689 aaKnown RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 RAB5AP20339 215 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PSMB2P49721 201 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 SPEM2Q0P670 501 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 EXOSC7Q15024 291 aaKnown RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 IRF4Q15306 451 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FAM198BQ6UWH4 519 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FRMD1Q8N878 549 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 SYNPRQ8TBG9 265 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 CD200R1Q8TD46 325 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 FUBP1Q96AE4 644 aaKnown RBP11.74□□□□□ -0.53
TCF4-248ENST00000616053 ADAM29Q9UKF5 820 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 DRD5P21918 477 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 PEX2P28328 305 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 LTBQ06643 244 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 ARHGAP1Q07960 439 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 SLC9A3R2Q15599 337 aa11.74□□□□□ -0.53
TCF4-248ENST00000616053 STACQ99469 402 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms