RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 CHTF18Q8WVB6 975 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PIGQQ9BRB3 760 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 LINC00597Q9H2U6 94 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC23A2Q9UGH3 650 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF223Q9UK11 482 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 TRPM6Q9BX84 2022 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 hCG_1809904A0A1W2PP81 198 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 A0A1W2PPE2 198 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 A0A1W2PR64 198 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 A0A1W2PRV1 198 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 C20orf202A1L168 122 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 GABARAPH6UMI1 98 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 AP1G1O43747 822 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 GABARAPO95166 117 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 WNT11O96014 354 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 TACR3P29371 465 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 BTG1P62324 171 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 EMC4Q5J8M3 183 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 AADACL3Q5VUY0 350 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HIST2H3AQ71DI3 136 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR52I1Q8NGK6 324 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC25A21Q9BQT8 299 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 MS4A8Q9BY19 250 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SCPEP1Q9HB40 452 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 RCE1Q9Y256 329 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 EMC9Q9Y3B6 208 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ARRDC5A6NEK1 342 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 MRPL33O75394 65 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 NCR1O76036 304 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 NUDT7P0C024 238 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SLC35E2P0CK97 266 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 CHRNB4P30926 498 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 CLDN2P57739 230 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 GPLD1P80108 840 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 TEKQ02763 1124 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 DEFB133Q30KQ1 61 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PELI3Q8N2H9 469 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZBED3Q96IU2 234 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 KATNB1Q9BVA0 655 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 SGPP1Q9BX95 441 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 POFUT1Q9H488 388 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 MOB1AQ9H8S9 216 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 LMAN1LQ9HAT1 526 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HCFC1R1Q9NWW0 138 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 VSX1Q9NZR4 365 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 WNK3Q9BYP7 1800 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF705FA8MVS1 300 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 TMEM127O75204 238 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF705DP0CH99 300 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 ZNF705BP0CI00 300 aaPredicted RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 PSMB1P20618 241 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 IL2RGP31785 369 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 HTR5AP47898 357 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 RFX2P48378 723 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 MTCP1P56278 107 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 UBE2KP61086 200 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 TMEM52BQ4KMG9 183 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR51A2Q8NGJ7 313 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 OR4A16Q8NH70 328 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 DOK4Q8TEW6 326 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 UTP23Q9BRU9 249 aaKnown RBP4.24□□□□□ -1.73
CHD9-221ENST00000615216 ISYNA1Q9NPH2 558 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 PRDM9Q9NQV7 894 aa4.24□□□□□ -1.73
CHD9-221ENST00000615216 IGLV3-10A0A075B6K4 115 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 TLCD2A6NGC4 264 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 OIP5O43482 229 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 RGS11O94810 467 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 METTL15P1P0C7V9 234 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 NFYBP25208 207 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 C21orf33P30042 268 aaPredicted RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 GIPRP48546 466 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PPT1P50897 306 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ALKBH1Q13686 389 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 EXT1Q16394 746 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SLCO4C1Q6ZQN7 724 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 FCRLAQ7L513 359 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ENTHD1Q8IYW4 607 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 MRPL43Q8N983 215 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 UTP4Q969X6 686 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 MUCL1Q96DR8 90 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 RANGRFQ9HD47 186 aaPredicted RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 PLEKHM1Q9Y4G2 1056 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ANKRD36A6QL64 1941 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 NPIPA5A0A0B4J1W7 369 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 OR2A25A4D2G3 310 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 MEIS3P1A6NDR6 274 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 NPIPA7E9PJI5 369 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 TRAPPC2P0DI81 140 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 TRAPPC2BP0DI82 140 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 NPIPA8P0DM63 369 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 AADACP22760 399 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 HLA-FP30511 346 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 RPS18P62269 152 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 RNLSQ5VYX0 342 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 SLC16A14Q7RTX9 510 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PIWIL3Q7Z3Z3 882 aaKnown RBP4.23□□□□□ -1.73
CHD9-221ENST00000615216 GDF7Q7Z4P5 450 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ADIPOR2Q86V24 386 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 PXT1Q8NFP0 134 aa4.23□□□□□ -1.73
CHD9-221ENST00000615216 ABHD4Q8TB40 342 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms