RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 TNFRSF13CQ96RJ3 184 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TEX12Q9BXU0 123 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TMEM185BQ9H7F4 350 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 FANCFQ9NPI8 374 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 PNPLA3Q9NST1 481 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 UBAP1Q9NZ09 502 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 SLC6A5Q9Y345 797 aa10.25□□□□□ -0.77
SLIRP-212ENST00000613856 TACC2O95359 2948 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 A0A1W2PNV4 684 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 NPIPB13A6NJU9 1138 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 NPIPB4C9JG80 1138 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 M0R082 166 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ARPC3O15145 178 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ACTL6AO96019 429 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 IGHG3P01860 377 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 HMGN1P05114 100 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CELA3AP09093 270 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF24P17028 368 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 GABRB1P18505 474 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SFTPDP35247 375 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 DIO1P49895 249 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CSNK2A1P68400 391 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SLC35A1P78382 337 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 RPL18Q07020 188 aaKnown RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CD47Q08722 323 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ZP4Q12836 540 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SLC10A1Q14973 349 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 MAD2L1BPQ15013 274 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 OR7A5Q15622 319 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 BCL2A1Q16548 175 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CTU2Q2VPK5 515 aaKnown RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 TMEM176BQ3YBM2 270 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 RNFT1Q5M7Z0 435 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 TMEM236Q5W0B7 351 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ACSM5Q6NUN0 579 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ARHGAP11AQ6P4F7 1023 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 UGT2A3Q6UWM9 527 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CASP12Q6UXS9 341 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 TMPPEQ6ZT21 453 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ESPNLQ6ZVH7 1005 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 TRILQ7L0X0 811 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 GGNQ86UU5 652 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 FJX1Q86VR8 437 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ENTHD1Q8IYW4 607 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 IQCF1Q8N6M8 205 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ATP6V1C2Q8NEY4 427 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF417Q8TAU3 575 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SLC25A36Q96CQ1 311 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ADGRG7Q96K78 797 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SLC38A2Q96QD8 506 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF587Q96SQ5 575 aaPredicted RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 POLDIP3Q9BY77 421 aaKnown RBP10.24□□□□□ -0.77
SLIRP-212ENST00000613856 SLC6A15Q9H2J7 730 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 CHST11Q9NPF2 352 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 NRIP3Q9NQ35 241 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 IMPAD1Q9NX62 359 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 RNF6Q9Y252 685 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 B3GALT5Q9Y2C3 310 aa10.24□□□□□ -0.77
SLIRP-212ENST00000613856 A0A0J9YW62 118 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 A0A1W2PNR3 127 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 MCIDASD6RGH6 385 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 SULT2B1O00204 365 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 PLPP3O14495 311 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 IMPA2O14732 288 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 TFECO14948 347 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-212ENST00000613856 SURF4O15260 269 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 IDH3BO43837 385 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 EIF1BO60739 113 aaKnown RBP10.23□□□□□ -0.77
SLIRP-212ENST00000613856 TXNDC12O95881 172 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 IGHMP01871 453 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 CD14P08571 375 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 AQP2P41181 271 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 PCYT1AP49585 367 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 LHX2P50458 406 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 KRTAP10-9P60411 292 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 SNRPGP62308 76 aaKnown RBP10.23□□□□□ -0.77
SLIRP-212ENST00000613856 EFNB1P98172 346 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 IL5RAQ01344 420 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 PMP22Q01453 160 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 PMS2P3Q13401 168 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 GXYLT1Q4G148 440 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 ALG10Q5BKT4 473 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 CLEC12AQ5QGZ9 265 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 TMEM201Q5SNT2 666 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 SLC25A30Q5SVS4 291 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 PAQR6Q6TCH4 344 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 H1FNTQ75WM6 255 aaPredicted RBP10.23□□□□□ -0.77
SLIRP-212ENST00000613856 ST6GALNAC3Q8NDV1 305 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 OR8J1Q8NGP2 316 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 MOSPD2Q8NHP6 518 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 RHOXF1Q8NHV9 184 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 NEIL3Q8TAT5 605 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 IFT27Q9BW83 186 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 ENKD1Q9H0I2 346 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 CMC2Q9NRP2 79 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 ZNF226Q9NYT6 803 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 TAS2R5Q9NYW4 299 aa10.23□□□□□ -0.77
SLIRP-212ENST00000613856 TRGV5A0A0B4J1U4 118 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 A0A1B0GVC2 190 aa10.22□□□□□ -0.77
SLIRP-212ENST00000613856 AQP7P3A6NL99 342 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms