RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 TIMP3P35625 211 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 CA7P43166 264 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 SLC16A1P53985 500 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 ESRRGP62508 458 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 SLC17A1Q14916 467 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 TMEM211Q6ICI0 200 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 C3P1Q6ZMU1 363 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 GALNT5Q7Z7M9 940 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 GALNT4Q8N4A0 578 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 ABHD3Q8WU67 409 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 TACO1Q9BSH4 297 aaKnown RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 EGLN3Q9H6Z9 239 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 EMC3Q9P0I2 261 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 TMEFF2Q9UIK5 374 aaPredicted RBP13.11□□□□□ -0.31
CD48-203ENST00000613788 FAM215AQ9Y5M1 114 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 SVILO95425 2214 aa13.11□□□□□ -0.31
CD48-203ENST00000613788 A0A1W2PRG6 482 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 ZNF716A6NP11 495 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 E9PLN8 166 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 SOX14O95416 240 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 IL2RAP01589 272 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 F13BP05160 661 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 STSP08842 583 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 POU1F1P28069 291 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 PER3P56645 1201 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 CTXN1P60606 82 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 MRPL49Q13405 166 aaKnown RBP13.1□□□□□ -0.31
CD48-203ENST00000613788 EIF2S3LQ2VIR3 472 aaKnown RBP13.1□□□□□ -0.31
CD48-203ENST00000613788 SLC36A3Q495N2 470 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 PLXDC2Q6UX71 529 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 CREB3L2Q70SY1 520 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 KIF18BQ86Y91 864 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 OR9K2Q8NGE7 335 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 GMPPAQ96IJ6 420 aaPredicted RBP13.1□□□□□ -0.31
CD48-203ENST00000613788 SAMD8Q96LT4 415 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 ZFP3Q96NJ6 502 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 RDH12Q96NR8 316 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 VKORC1Q9BQB6 163 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 TTYH2Q9BSA4 534 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 BCO1Q9HAY6 547 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 TBC1D23Q9NUY8 699 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 B3GAT1Q9P2W7 334 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 SH3BGRL2Q9UJC5 107 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 KALRNO60229 2985 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 GTF3C1Q12789 2109 aa13.1□□□□□ -0.31
CD48-203ENST00000613788 IGKV3D-15A0A087WSY6 115 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 ZNF724A8MTY0 619 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 MITFO75030 526 aaPredicted RBP13.09□□□□□ -0.31
CD48-203ENST00000613788 SERPINI2O75830 405 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 TP53P04637 393 aaPredicted RBP13.09□□□□□ -0.31
CD48-203ENST00000613788 YES1P07947 543 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 CD14P08571 375 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 PTDSS1P48651 473 aaKnown RBP13.09□□□□□ -0.31
CD48-203ENST00000613788 CRISP1P54107 249 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 POU3F1Q03052 451 aaPredicted RBP13.09□□□□□ -0.31
CD48-203ENST00000613788 IGFBP7Q16270 282 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 TMEM201Q5SNT2 666 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 THSD4Q6ZMP0 1018 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 LRRC75AQ8NAA5 344 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 C9orf106Q8NAJ2 232 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 NRG4Q8WWG1 115 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 GPX7Q96SL4 187 aaPredicted RBP13.09□□□□□ -0.31
CD48-203ENST00000613788 IFT27Q9BW83 186 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 TSSK6Q9BXA6 273 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 ENKD1Q9H0I2 346 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 IL20RAQ9UHF4 553 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 BAIAP2Q9UQB8 552 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 SHANK1Q9Y566 2161 aa13.09□□□□□ -0.31
CD48-203ENST00000613788 NPIPB13A6NJU9 1138 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.31
CD48-203ENST00000613788 NPIPB4C9JG80 1138 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 MCIDASD6RGH6 385 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 AKAP8O43823 692 aaKnown RBP13.08□□□□□ -0.31
CD48-203ENST00000613788 BCL10O95999 233 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 CRHP06850 196 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 GLI4P10075 376 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 HLA-DOBP13765 273 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.31
CD48-203ENST00000613788 RPS6KA3P51812 740 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 PMPCAQ10713 525 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 NPRL3Q12980 569 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 SNCBQ16143 134 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 SEM1Q6ZVN7 128 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 SLC35D2Q76EJ3 337 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 IGFN1Q86VF2 1251 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 TUSC5Q8IXB3 177 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 OR2T33Q8NG76 320 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 KATNB1Q9BVA0 655 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 TEX12Q9BXU0 123 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 POLDIP3Q9BY77 421 aaKnown RBP13.08□□□□□ -0.31
CD48-203ENST00000613788 TXNIPQ9H3M7 391 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 NRIP3Q9NQ35 241 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 PARPBPQ9NWS1 579 aa13.08□□□□□ -0.31
CD48-203ENST00000613788 SMPD3Q9NY59 655 aaPredicted RBP13.08□□□□□ -0.31
CD48-203ENST00000613788 ING1Q9UK53 422 aaPredicted RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms