RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PIRO00625 290 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TBX19O60806 448 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SCGB2A1O75556 95 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CR2P20023 1033 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TAS2R30P59541 319 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CFAP161Q6P656 301 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CEACAM20Q6UY09 585 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RNF111Q6ZNA4 994 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OVCA2Q8WZ82 227 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CREBBPQ92793 2442 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FOLR1P15328 257 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 HSD3B2P26439 372 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CX3CR1P49238 355 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 NDUFV1P49821 464 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SOX10P56693 466 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MFGE8Q08431 387 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PRAMEF20Q5VT98 475 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 LCTLQ6UWM7 567 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF808Q8N4W9 903 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FAM151AQ8WW52 585 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 COPS7AQ9UBW8 275 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SERPINE3A8MV23 424 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ICAM1P05362 532 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 DBIP07108 87 aaKnown RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SYPP08247 313 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TAS2R38P59533 333 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PAX5Q02548 391 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PAGE3Q5JUK9 113 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SPNS3Q6ZMD2 512 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SLC16A14Q7RTX9 510 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SLC51AQ86UW1 340 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR6X1Q8NH79 312 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SERINC1Q9NRX5 453 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 AJAP1Q9UKB5 411 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FZD10Q9ULW2 581 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 A6NLC8 198 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GP1BAP07359 652 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GCH1P30793 250 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ARR3P36575 388 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ACVR1BP36896 505 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RPIAP49247 311 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 BDH1Q02338 343 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PMS2P11Q13670 270 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 HABP2Q14520 560 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GPR157Q5UAW9 335 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SAMD13Q5VXD3 122 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF66Q6ZN08 573 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GALNT16Q8N428 558 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR2T27Q8NH04 317 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FGFBP2Q9BYJ0 223 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SYNPO2LQ9H987 977 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CLEC2DQ9UHP7 191 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MED31Q9Y3C7 131 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PIAS3Q9Y6X2 628 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PTPRZ1P23471 2315 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 C7orf77A4D0Y5 90 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RAC2P15153 192 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ABOP16442 354 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GNRHRP30968 328 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ZP2Q05996 745 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TPBGQ13641 420 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 WDR74Q6RFH5 385 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 C12orf54Q6X4T0 127 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 UBR3Q6ZT12 1888 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 BBS10Q8TAM1 723 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TNFRSF14Q92956 283 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 UPRTQ96BW1 309 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ASB8Q9H765 288 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 PLEKHA2Q9HB19 425 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 VAX2Q9UIW0 290 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 CCDC187A0A096LP49 1063 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 MFNGO00587 321 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 BNIP3LO60238 219 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GABRA1P14867 456 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 NHLRC3Q5JS37 347 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FAM74A1Q5RGS3 127 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR52R1Q8NGF1 315 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 JOSD2Q8TAC2 188 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TBX5Q99593 518 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 GPR20Q99678 358 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR51I2Q9H344 312 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 VSTM5A8MXK1 200 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SLC25A14O95258 325 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ARRB2P32121 409 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 ARF6P62330 175 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 KCTD11Q693B1 232 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 RTL6Q6ICC9 239 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR4F3Q6IEY1 312 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TNFAIP8L2Q6P589 184 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 FBXO16Q8IX29 292 aaPredicted RBP4.61□□□□□ -1.67
VPS13D-213ENST00000613099 OR5AP2Q8NGF4 316 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 DHDHQ9UQ10 334 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 UBIAD1Q9Y5Z9 338 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SVILO95425 2214 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 TRBV23-1A0A0A0MS06 115 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 A6NIN4 97 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SULT1A3P0DMM9 295 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 SULT1A4P0DMN0 295 aa4.61□□□□□ -1.67
VPS13D-213ENST00000613099 EPHA2P29317 976 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms