RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 SEC61A2Q9H9S3 476 aa13.64□□□□□ -0.23
HDDC2-210ENST00000609574 NOX3Q9HBY0 568 aa13.64□□□□□ -0.23
HDDC2-210ENST00000609574 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
HDDC2-210ENST00000609574 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
HDDC2-210ENST00000609574 AIM2O14862 343 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 OR2T1O43869 369 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 EGR1P18146 543 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 TCN1P20061 433 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-210ENST00000609574 RPS4Y1P22090 263 aaKnown RBP13.63□□□□□ -0.23
HDDC2-210ENST00000609574 P2RY4P51582 365 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 CRISP3P54108 245 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 MYBPC1Q00872 1141 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 PLAURQ03405 335 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 GSG1Q2KHT4 349 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 CLDND2Q8NHS1 167 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 MRPL24Q96A35 216 aaKnown RBP13.63□□□□□ -0.23
HDDC2-210ENST00000609574 OR52E6Q96RD3 313 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 SUCNR1Q9BXA5 334 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 SLC52A3Q9NQ40 469 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 TREM2Q9NZC2 230 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 POFUT2Q9Y2G5 429 aa13.63□□□□□ -0.23
HDDC2-210ENST00000609574 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF99A8MXY4 864 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 BCL10O95999 233 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 GAAP10253 952 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 PNMTP11086 282 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 EPHA1P21709 976 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 GLRXP35754 106 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 ACAA2P42765 397 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 RPS5P46782 204 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 MRPS11P82912 194 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF836Q6ZNA1 936 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 PNPT1Q8TCS8 783 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 NELFAQ9H3P2 528 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 DENND2DQ9H6A0 471 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
HDDC2-210ENST00000609574 FBXL3Q9UKT7 428 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
HDDC2-210ENST00000609574 MGAM2Q2M2H8 2515 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 A0A1W2PPW3 197 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 M0R3G1 203 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 RAB36O95755 333 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 PNPP00491 289 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 SERPINE1P05121 402 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 GSNP06396 782 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 COL8A2P25067 703 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ARRB2P32121 409 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 CRATP43155 626 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ALDH3B1P43353 468 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 RPL14P50914 215 aaKnown RBP13.61□□□□□ -0.23
HDDC2-210ENST00000609574 NME5P56597 212 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 HILS1P60008 231 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ABCE1P61221 599 aaKnown RBP13.61□□□□□ -0.23
HDDC2-210ENST00000609574 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 PDCD4Q53EL6 469 aaKnown RBP13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ELFN2Q5R3F8 820 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ACSM5Q6NUN0 579 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 BPIFB2Q8N4F0 458 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 SYT3Q9BQG1 590 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
HDDC2-210ENST00000609574 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
HDDC2-210ENST00000609574 TENM1Q9UKZ4 2725 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 A0A0G2JPF8 293 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF726A6NNF4 738 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HNRNPCL2B2RXH8 293 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HNRNPCL3B7ZW38 293 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 RFXANKO14593 260 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
HDDC2-210ENST00000609574 NPIPB7O75200 414 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ENTPD5O75356 428 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ANP32DO95626 131 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HLA-HP01893 362 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HPXP02790 462 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 HNRNPCL4P0DMR1 293 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
HDDC2-210ENST00000609574 TEKQ02763 1124 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 PIGFQ07326 219 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 NKPD1Q17RQ9 610 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 COX20Q5RI15 118 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF813Q6ZN06 617 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 H1FNTQ75WM6 255 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-210ENST00000609574 MYPOPQ86VE0 399 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-210ENST00000609574 UEVLDQ8IX04 471 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 SLC38A4Q969I6 547 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 SPATA9Q9BWV2 254 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ROPN1BQ9BZX4 212 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ZNF385DQ9H6B1 395 aa13.6□□□□□ -0.23
HDDC2-210ENST00000609574 ROPN1Q9HAT0 212 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms