RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 BAP18Q8IXM2 172 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 NUDCD2Q8WVJ2 157 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 DVL3Q92997 716 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 ELF4Q99607 663 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 ZPBPQ9BS86 351 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 NDUFAF3Q9BU61 184 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 ASCL3Q9NQ33 180 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 ZMIZ1Q9ULJ6 1067 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 EXOGQ9Y2C4 368 aaKnown RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 HHLA1C9JL84 531 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 DLEU1O43261 78 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 UGDHO60701 494 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 THBS1P07996 1170 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 TPT1P13693 172 aaKnown RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 KCNE1P15382 129 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 RGRP47804 291 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 PCBP4P57723 403 aaKnown RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 GPNMBQ14956 572 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SAPCD1Q5SSQ6 148 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 PXKQ7Z7A4 578 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 LRRC56Q8IYG6 542 aaPredicted RBP11.54□□□□□ -0.56
CTCFL-218ENST00000608440 UMODL1-AS1Q8N2C9 162 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 GPR137CQ8N3F9 429 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SYNPRQ8TBG9 265 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SLC38A5Q8WUX1 472 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 OR8D1Q8WZ84 308 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 TMEM19Q96HH6 336 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 C4orf36Q96KX1 117 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 DEFB118Q96PH6 123 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SNHG12Q9BXW3 62 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SLC25A18Q9H1K4 315 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 RGCCQ9H4X1 137 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 SYNPO2LQ9H987 977 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 OR2S2Q9NQN1 319 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 LANCL2Q9NS86 450 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 TMEM100Q9NV29 134 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 TIMM10BQ9Y5J6 103 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 MMP24Q9Y5R2 645 aa11.54□□□□□ -0.56
CTCFL-218ENST00000608440 OR52A4PA6NMU1 304 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 RNASET2O00584 256 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 PPP1R3DO95685 299 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 CDK2P24941 298 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 PYCR1P32322 319 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 CSNK1DP48730 415 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 SULT1A1P50225 295 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 PRKXP51817 358 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 OR12D2P58182 307 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 SLC26A5P58743 744 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 GABREP78334 506 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 RAE1P78406 368 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 INSM1Q01101 510 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TSPAN31Q12999 210 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 EXOSC6Q5RKV6 272 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 YOD1Q5VVQ6 348 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 ARHGAP11AQ6P4F7 1023 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FAM151BQ6UXP7 276 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FAM83HQ6ZRV2 1179 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 LANCL3Q6ZV70 420 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 HIST2H3AQ71DI3 136 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 ZNF280BQ86YH2 543 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TRAPPC5Q8IUR0 188 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 ACBD4Q8NC06 268 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 NPRL2Q8WTW4 380 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 PIK3IP1Q96FE7 263 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FAM46AQ96IP4 442 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 DDA1Q9BW61 102 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FKRPQ9H9S5 495 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 APMAPQ9HDC9 416 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 SLC23A2Q9UGH3 650 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 LAMA3Q16787 3333 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FAM86C2PA6NEL3 165 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 NUDT19A8MXV4 375 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 DCTN6O00399 190 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 RPLP2P05387 115 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FAM157CP0CG43 387 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 CKBP12277 381 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 MYOGP15173 224 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 HTR1FP30939 366 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 APLNRP35414 380 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 FNDC3BQ53EP0 1204 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 RNASE10Q5GAN6 216 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 NKAIN2Q5VXU1 208 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TIPARPQ7Z3E1 657 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 C5orf24Q7Z6I8 188 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 GLB1L2Q8IW92 636 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 OR10AD1Q8NGE0 317 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 OR2A12Q8NGT7 310 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 OR6K2Q8NGY2 324 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 UBTD2Q8WUN7 234 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 RAB24Q969Q5 203 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 ADAM2Q99965 735 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 TWSG1Q9GZX9 223 aa11.53□□□□□ -0.56
CTCFL-218ENST00000608440 HINT3Q9NQE9 182 aaKnown RBP11.53□□□□□ -0.56
CTCFL-218ENST00000608440 SEC14L6B5MCN3 397 aa11.52□□□□□ -0.56
CTCFL-218ENST00000608440 SAP18O00422 153 aaKnown RBP11.52□□□□□ -0.56
CTCFL-218ENST00000608440 PPP1R2P9O14990 202 aa11.52□□□□□ -0.56
CTCFL-218ENST00000608440 SURF4O15260 269 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms