RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 NOX3Q9HBY0 568 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 GPR160Q9UJ42 338 aa13.64□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF346Q9UL40 294 aaKnown RBP13.64□□□□□ -0.23
HDDC2-203ENST00000608284 AIM2O14862 343 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 OR2T1O43869 369 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 EGR1P18146 543 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 TCN1P20061 433 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-203ENST00000608284 RPS4Y1P22090 263 aaKnown RBP13.63□□□□□ -0.23
HDDC2-203ENST00000608284 P2RY4P51582 365 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 CRISP3P54108 245 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 MYBPC1Q00872 1141 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 PLAURQ03405 335 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 GSG1Q2KHT4 349 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 CLDND2Q8NHS1 167 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 MRPL24Q96A35 216 aaKnown RBP13.63□□□□□ -0.23
HDDC2-203ENST00000608284 OR52E6Q96RD3 313 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 SUCNR1Q9BXA5 334 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 SLC52A3Q9NQ40 469 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 TREM2Q9NZC2 230 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 POFUT2Q9Y2G5 429 aa13.63□□□□□ -0.23
HDDC2-203ENST00000608284 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.63□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF99A8MXY4 864 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 BCL10O95999 233 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 GAAP10253 952 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 PNMTP11086 282 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 EPHA1P21709 976 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 GLRXP35754 106 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 ACAA2P42765 397 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 RPS5P46782 204 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 MRPS11P82912 194 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF836Q6ZNA1 936 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 NET1Q7Z628 596 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 VRK2Q86Y07 508 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 PNPT1Q8TCS8 783 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 NELFAQ9H3P2 528 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 DENND2DQ9H6A0 471 aaPredicted RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
HDDC2-203ENST00000608284 FBXL3Q9UKT7 428 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 IFT52Q9Y366 437 aa13.62□□□□□ -0.23
HDDC2-203ENST00000608284 MGAM2Q2M2H8 2515 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 A0A1W2PPW3 197 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 M0R3G1 203 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 RAB36O95755 333 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 PNPP00491 289 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 SERPINE1P05121 402 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 GSNP06396 782 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 COL8A2P25067 703 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ARRB2P32121 409 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 CRATP43155 626 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ALDH3B1P43353 468 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 RPL14P50914 215 aaKnown RBP13.61□□□□□ -0.23
HDDC2-203ENST00000608284 NME5P56597 212 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 HILS1P60008 231 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ABCE1P61221 599 aaKnown RBP13.61□□□□□ -0.23
HDDC2-203ENST00000608284 GLIPR1L2Q4G1C9 344 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 PDCD4Q53EL6 469 aaKnown RBP13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ELFN2Q5R3F8 820 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 RNF220Q5VTB9 566 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ACSM5Q6NUN0 579 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 BPIFB2Q8N4F0 458 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 SYT3Q9BQG1 590 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 DUSP13Q9UII6 198 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF443Q9Y2A4 671 aaPredicted RBP13.61□□□□□ -0.23
HDDC2-203ENST00000608284 RAP2CQ9Y3L5 183 aa13.61□□□□□ -0.23
HDDC2-203ENST00000608284 TENM1Q9UKZ4 2725 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 A0A0G2JPF8 293 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 WDR91A4D1P6 747 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF726A6NNF4 738 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HNRNPCL2B2RXH8 293 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HNRNPCL3B7ZW38 293 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 RFXANKO14593 260 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 NPIPB7O75200 414 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ENTPD5O75356 428 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ANP32DO95626 131 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HLA-HP01893 362 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HPXP02790 462 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 HNRNPCL4P0DMR1 293 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 NQO1P15559 274 aaKnown RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 TEKQ02763 1124 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 PIGFQ07326 219 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 NKPD1Q17RQ9 610 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 MMEL1Q495T6 779 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 COX20Q5RI15 118 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF813Q6ZN06 617 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 H1FNTQ75WM6 255 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 MYPOPQ86VE0 399 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 UEVLDQ8IX04 471 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF781Q8N8C0 355 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 SLC38A4Q969I6 547 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 SPATA9Q9BWV2 254 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ROPN1BQ9BZX4 212 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF385DQ9H6B1 395 aa13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ROPN1Q9HAT0 212 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-203ENST00000608284 ZNF275Q9NSD4 429 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms