RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, human

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBE1-209	ENST00000604814	PP2D1	A8MPX8	630 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814		E5RI56	91 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	hCG_2039718	K7EN88	272 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	DCTN6	O00399	190 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	RBMXL2	O75526	392 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	OXSR1	O95747	527 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ANGPTL1	O95841	491 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	SLPI	P03973	132 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	CFL1	P23528	166 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	C21orf33	P30042	268 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	DNASE1L1	P49184	302 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	HMGA2	P52926	109 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ABCE1	P61221	599 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ZNHIT3	Q15649	155 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	INPP5J	Q15735	1006 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	C2CD6	Q53TS8	623 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	WASHC2D	Q5SRD0	308 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	MARCH8	Q5T0T0	291 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ATP1A1-AS1	Q5TC04	95 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	THOC7	Q6I9Y2	204 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR5M10	Q6IEU7	315 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	GDPD4	Q6W3E5	623 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	CYP4Z2P	Q8N1L4	340 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	CCNYL1	Q8N7R7	359 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR1S2	Q8NGQ3	325 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR6K2	Q8NGY2	324 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	DTD1	Q8TEA8	209 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	SETD7	Q8WTS6	366 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	PACRG	Q96M98	296 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	COPS4	Q9BT78	406 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	SAMSN1	Q9NSI8	373 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	TMEM30A	Q9NV96	361 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	TEX10	Q9NXF1	929 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ELF5	Q9UKW6	265 aa	Predicted RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	CLEC4E	Q9ULY5	219 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	RCL1	Q9Y2P8	373 aa	Known RBP	4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	GMPPB	Q9Y5P6	360 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	NEDD4	P46934	1319 aa		4.62	□□□□□ -1.67
TUBE1-209	ENST00000604814	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814		K7ERI5	159 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	HSD17B6	O14756	317 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	CXCL13	O43927	109 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	OR7A10	O76100	309 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	GIMD1	P0DJR0	217 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	COX5B	P10606	129 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	EFNA1	P20827	205 aa	Predicted RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	HOXD3	P31249	432 aa	Predicted RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ARR3	P36575	388 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	CAPZB	P47756	277 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	RASSF2	P50749	326 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	PRELP	P51888	382 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	RIPK4	P57078	832 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	RPS13	P62277	151 aa	Known RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	RIG	Q13278	110 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	NAB1	Q13506	487 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	LAGE3	Q14657	143 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	MAD2L1BP	Q15013	274 aa	Predicted RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	TMEM249	Q2WGJ8	235 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	LY6G5C	Q5SRR4	150 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	TRNP1	Q6NT89	227 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	COX15	Q7KZN9	410 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ZFAND4	Q86XD8	727 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	MREG	Q8N565	214 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	C15orf54	Q8N8G6	183 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	SLC7A13	Q8TCU3	470 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	TOMM40L	Q969M1	308 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	RAD51AP1	Q96B01	352 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	SNF8	Q96H20	258 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ING2	Q9H160	280 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	PORCN	Q9H237	461 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ARMC7	Q9H6L4	198 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	EML4	Q9HC35	981 aa	Known RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ACP6	Q9NPH0	428 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	IL36RN	Q9UBH0	155 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	EIF3K	Q9UBQ5	218 aa	Known RBP	4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ZNHIT2	Q9UHR6	403 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ICAM5	Q9UMF0	924 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814		V9GYQ6	96 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	CGNL1	Q0VF96	1302 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	ZMYM2	Q9UBW7	1377 aa		4.61	□□□□□ -1.67
TUBE1-209	ENST00000604814	IGHV2-70D	A0A0C4DH43	119 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GLTPD2	A6NH11	291 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814		H3BNX3	289 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	FCN1	O00602	326 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	MPDU1	O75352	247 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE7	O76087	117 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	CLDN14	O95500	239 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE12F	P0CL80	117 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE12G	P0CL81	117 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE12I	P0CL82	117 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	RNH1	P13489	461 aa	Known RBP	4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	CXCR2	P25025	360 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	SAA4	P35542	130 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	RFX5	P48382	616 aa	Predicted RBP	4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	DAP3	P51398	398 aa	Known RBP	4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	CLDN6	P56747	220 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	LTB	Q06643	244 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE1	Q13065	139 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	GAGE4	Q13068	117 aa		4.6	□□□□□ -1.67
TUBE1-209	ENST00000604814	SF3A2	Q15428	464 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms