RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 LINGO2Q7L985 606 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 GPR137CQ8N3F9 429 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 ANKK1Q8NFD2 765 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 OR10A6Q8NH74 314 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 BCL2L2Q92843 193 aaPredicted RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 ADAD1Q96M93 576 aaKnown RBP15.83■□□□□ 0.12
CCDC12-208ENST00000603885 TMEM43Q9BTV4 400 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 HIVEP2P31629 2446 aa15.83■□□□□ 0.12
CCDC12-208ENST00000603885 FN1P02751 2386 aaKnown RBP15.82■□□□□ 0.12
CCDC12-208ENST00000603885 FBP2O00757 339 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 TRAF3IP2O43734 574 aaPredicted RBP15.82■□□□□ 0.12
CCDC12-208ENST00000603885 NDUFS7O75251 213 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 BGLAPP02818 100 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 ACVR1BP36896 505 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 ARFIP2P53365 341 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 C11orf71Q6IPW1 123 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 ANKRD16Q6P6B7 361 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 UEVLDQ8IX04 471 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 C10orf53Q8N6V4 93 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 SCAIQ8N9R8 606 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 PIK3C3Q8NEB9 887 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 GPR32P1Q8NGA4 272 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 MAGEE2Q8TD90 523 aaPredicted RBP15.82■□□□□ 0.12
CCDC12-208ENST00000603885 SLC26A7Q8TE54 656 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 SLC41A3Q96GZ6 507 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 SH3GL1Q99961 368 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 KCNS3Q9BQ31 491 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 CACNG6Q9BXT2 260 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 MOV10Q9HCE1 1003 aaKnown RBP15.82■□□□□ 0.12
CCDC12-208ENST00000603885 FGFR1OP2Q9NVK5 253 aa15.82■□□□□ 0.12
CCDC12-208ENST00000603885 GDF2Q9UK05 429 aaPredicted RBP15.82■□□□□ 0.12
CCDC12-208ENST00000603885 ARPC4-TTLL3A0A0A6YYG9 625 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 RNF223E7ERA6 249 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 ATP6V1G2-DDX39BF2Z307 99 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 RPL36A-HNRNPH2H7BZ11 118 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 CHP2O43745 196 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 HOXB1P14653 301 aaPredicted RBP15.81■□□□□ 0.12
CCDC12-208ENST00000603885 PMS2P3Q13401 168 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 VMACQ2NL98 169 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 MMEL1Q495T6 779 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 COQ5Q5HYK3 327 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 NANOGP8Q6NSW7 305 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 OR6T1Q8NGN1 323 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 VANGL1Q8TAA9 524 aaPredicted RBP15.81■□□□□ 0.12
CCDC12-208ENST00000603885 RASSF5Q8WWW0 418 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 MOGAT1Q96PD6 335 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 SLC38A2Q96QD8 506 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 OR2M2Q96R28 347 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 NANOGQ9H9S0 305 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 MRPL39Q9NYK5 338 aaKnown RBP15.81■□□□□ 0.12
CCDC12-208ENST00000603885 MOKQ9UQ07 419 aa15.81■□□□□ 0.12
CCDC12-208ENST00000603885 A0A096LPE4 126 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 IGHV1-18A0A0C4DH31 117 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 A0A1W2PPZ6 126 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 CPSF4LA6NMK7 179 aaKnown RBP15.8■□□□□ 0.12
CCDC12-208ENST00000603885 BBIP1A8MTZ0 92 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 MS4A18H0YCH9 400 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 HPRP00739 348 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 MT-ATP6P00846 226 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 VIMP08670 466 aaKnown RBP15.8■□□□□ 0.12
CCDC12-208ENST00000603885 BMP4P12644 408 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 CD247P20963 164 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 GZMMP51124 257 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 ARF1P84077 181 aaKnown RBP15.8■□□□□ 0.12
CCDC12-208ENST00000603885 POU3F1Q03052 451 aaPredicted RBP15.8■□□□□ 0.12
CCDC12-208ENST00000603885 PUDPQ08623 228 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 KLF10Q13118 480 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 MAPRE2Q15555 327 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 NPTX1Q15818 432 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 MS4A18Q3C1V0 323 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 ENTPD8Q5MY95 495 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 TMEM123Q8N131 208 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 OR8J3Q8NGG0 315 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 TAMM41Q96BW9 452 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 LRRC58Q96CX6 371 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 ECSITQ9BQ95 431 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 REG4Q9BYZ8 158 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 NELFAQ9H3P2 528 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 CRLF2Q9HC73 371 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 GPR35Q9HC97 309 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 NOX1Q9Y5S8 564 aa15.8■□□□□ 0.12
CCDC12-208ENST00000603885 MRASO14807 208 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 SSX4O60224 188 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 NPPAP01160 153 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 CRYAAP02489 173 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 HLA-DOBP13765 273 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 APOBEC3AP31941 199 aaPredicted RBP15.79■□□□□ 0.12
CCDC12-208ENST00000603885 NUDT6P53370 316 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 TUBA1BP68363 451 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 TUBA4AP68366 448 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 CHRNB3Q05901 458 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 SF3A3Q12874 501 aaKnown RBP eCLIP15.79■□□□□ 0.12
CCDC12-208ENST00000603885 CEACAM16Q2WEN9 425 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 C3orf36Q3SXR2 165 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 RABL3Q5HYI8 236 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 REP15Q6BDI9 236 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 LINC00114Q6XXX2 140 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 DNM1P46Q6ZS02 220 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 TUBA1AQ71U36 451 aa15.79■□□□□ 0.12
CCDC12-208ENST00000603885 CCDC80Q76M96 950 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms