RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 PRR14Q9BWN1 585 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 KLHL14Q9P2G3 628 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 NOX1Q9Y5S8 564 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 ATP23Q9Y6H3 246 aa13.7□□□□□ -0.22
IRF3-226ENST00000600453 ALPK2Q86TB3 2170 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 IGKV1D-42A0A075B6H8 117 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 ARPC4-TTLL3A0A0A6YYG9 625 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 VSTM5A8MXK1 200 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 CHP2O43745 196 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TPST2O60704 377 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 UPK3AO75631 287 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 ZNF432O94892 652 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 CD8AP01732 235 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 APOBEC3AP31941 199 aaPredicted RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 CDKN1AP38936 164 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 ROR2Q01974 943 aaKnown RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 PMS2P3Q13401 168 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 SELPLGQ14242 412 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TBRG1Q3YBR2 411 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TTC33Q6PID6 262 aaPredicted RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 CCDC80Q76M96 950 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 COMTD1Q86VU5 262 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 BCL2L2Q92843 193 aaPredicted RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 POM121Q96HA1 1249 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 MPP4Q96JB8 637 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 LRR1Q96L50 414 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 SMR3AQ99954 134 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 FGFR1OP2Q9NVK5 253 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 MRPL39Q9NYK5 338 aaKnown RBP13.69□□□□□ -0.22
IRF3-226ENST00000600453 B3GAT1Q9P2W7 334 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 BAG5Q9UL15 447 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 PMF1-BGLAPU3KQ54 211 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 CSPG4Q6UVK1 2322 aa13.69□□□□□ -0.22
IRF3-226ENST00000600453 TRAPPC13A5PLN9 417 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 ZNF726A6NNF4 738 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 MS4A18H0YCH9 400 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 FBP2O00757 339 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 SLC22A2O15244 555 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 OR6A2O95222 327 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 LY6G6DO95868 133 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 CRYAAP02489 173 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 BGLAPP02818 100 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 CD247P20963 164 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 DSCR9P59020 149 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 KLF10Q13118 480 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 VEZF1Q14119 521 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 RAB35Q15286 201 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 MS4A18Q3C1V0 323 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 HIKESHIQ53FT3 197 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 ENTPD8Q5MY95 495 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 PXKQ7Z7A4 578 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 CIARTQ8N365 385 aaPredicted RBP13.68□□□□□ -0.22
IRF3-226ENST00000600453 OR6T1Q8NGN1 323 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 PROX1Q92786 737 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 ALKBH3Q96Q83 286 aaPredicted RBP13.68□□□□□ -0.22
IRF3-226ENST00000600453 SLC19A3Q9BZV2 496 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 MED4Q9NPJ6 270 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 AP3M1Q9Y2T2 418 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 HIVEP2P31629 2446 aa13.68□□□□□ -0.22
IRF3-226ENST00000600453 M0R3H8 397 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 MRASO14807 208 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 OPN1SWP03999 348 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 HIST1H2ABP04908 130 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 CBLP22681 906 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 GZMMP51124 257 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 PUDPQ08623 228 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 TNK1Q13470 666 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 HIST3H2AQ7L7L0 130 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 IL17RDQ8NFM7 739 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 ADAMTS16Q8TE57 1224 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 HIST1H2ACQ93077 130 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 SLC38A2Q96QD8 506 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 KATNB1Q9BVA0 655 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 POLR2J2Q9GZM3 115 aaKnown RBP13.67□□□□□ -0.22
IRF3-226ENST00000600453 PCDHAC1Q9H158 963 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 POLR2J3Q9H1A7 115 aaKnown RBP13.67□□□□□ -0.22
IRF3-226ENST00000600453 CCDC134Q9H6E4 229 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 GPR35Q9HC97 309 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 SEC14L4Q9UDX3 406 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 FBXO9Q9UK97 447 aaPredicted RBP13.67□□□□□ -0.22
IRF3-226ENST00000600453 NF1P21359 2839 aa13.67□□□□□ -0.22
IRF3-226ENST00000600453 LOC100653049A0A140TA62 436 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 CPSF4LA6NMK7 179 aaKnown RBP13.66□□□□□ -0.22
IRF3-226ENST00000600453 PLPP3O14495 311 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 KRT34O76011 436 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 HOXB4P17483 251 aaPredicted RBP13.66□□□□□ -0.22
IRF3-226ENST00000600453 AHCYP23526 432 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 ARR3P36575 388 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 ARF1P84077 181 aaKnown RBP13.66□□□□□ -0.22
IRF3-226ENST00000600453 SLC25A3Q00325 362 aa13.66□□□□□ -0.22
IRF3-226ENST00000600453 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
IRF3-226ENST00000600453 Q71RC1 249 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms