RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 PMF1-BGLAPU3KQ54 211 aa12.75□□□□□ -0.37
IRF3-223ENST00000599223 ARPC4-TTLL3A0A0A6YYG9 625 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 KRT33AO76009 404 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 KRT75O95678 551 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 OR4A8P0C604 315 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 PNMTP11086 282 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 BMP4P12644 408 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 SERPINF1P36955 418 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 CRATP43155 626 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 GZMKP49863 264 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 CRISP3P54108 245 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 HGFACQ04756 655 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 CARTPTQ16568 116 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 PDCD4Q53EL6 469 aaKnown RBP12.74□□□□□ -0.37
IRF3-223ENST00000599223 FAM120AOSQ5T036 256 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 C1QTNF12Q5T7M4 302 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 TMEM225Q6GV28 225 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 ARHGAP24Q8N264 748 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 ZNF837Q96EG3 531 aaPredicted RBP12.74□□□□□ -0.37
IRF3-223ENST00000599223 ZBTB18Q99592 522 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 VRK1Q99986 396 aaPredicted RBP12.74□□□□□ -0.37
IRF3-223ENST00000599223 TAPBPLQ9BX59 468 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 BPESC1Q9GZL8 116 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 PIF1Q9H611 641 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 TPT1P8Q9HAU6 139 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
IRF3-223ENST00000599223 LOC100289279A0A1B0GTE1 492 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 FZD7O75084 574 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 DNAJC8O75937 253 aaPredicted RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 ZNF432O94892 652 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 IGFBP1P08833 259 aaPredicted RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 APEHP13798 732 aaKnown RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 IDO1P14902 403 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 SRD5A1P18405 259 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 ATP4BP51164 291 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 ROR2Q01974 943 aaKnown RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 LRRC74AQ0VAA2 488 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 EFNB3Q15768 340 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 FAM166AQ6J272 317 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 ANKRD16Q6P6B7 361 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 ABHD12BQ7Z5M8 362 aaPredicted RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 MAL2Q969L2 176 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 KTI12Q96EK9 354 aaPredicted RBP12.73□□□□□ -0.37
IRF3-223ENST00000599223 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 PLK3Q9H4B4 646 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 KCNS2Q9ULS6 477 aa12.73□□□□□ -0.37
IRF3-223ENST00000599223 IGKV1D-42A0A075B6H8 117 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 LRP5LA4QPB2 252 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 NDUFS8O00217 210 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 GYG2O15488 501 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 SEC14L2O76054 403 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 PDE5AO76074 875 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 AHSA1O95433 338 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 IGKV3-15P01624 115 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 CRYAAP02489 173 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 ZCCHC18P0CG32 403 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 HOXB9P17482 250 aaPredicted RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 HTR2AP28223 471 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 IL2RGP31785 369 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 RPS5P46782 204 aaKnown RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 CLDN17P56750 224 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 UBE2NP61088 152 aaKnown RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 NCALDP61601 193 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 COPZ1P61923 177 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 KLF10Q13118 480 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 DNAL1Q4LDG9 190 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 ZCCHC24Q8N2G6 241 aaKnown RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 C10orf111Q8N326 155 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 GLB1L3Q8NCI6 653 aaPredicted RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 MAGEE2Q8TD90 523 aaPredicted RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 SPATA9Q9BWV2 254 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 LINC00470Q9BZP3 86 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 LRMDAQ9H2I8 198 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 SDR39U1Q9NRG7 319 aaPredicted RBP12.72□□□□□ -0.37
IRF3-223ENST00000599223 ARL8BQ9NVJ2 186 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 NDE1Q9NXR1 346 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 CALML5Q9NZT1 146 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 RASD1Q9Y272 281 aa12.72□□□□□ -0.37
IRF3-223ENST00000599223 A0A096LPI6 279 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 B9A039 149 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 ANKRD65E5RJM6 399 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 SLC22A3O75751 556 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 VAMP5O95183 116 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 IL6P05231 212 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 THBS4P35443 961 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 PPOXP50336 477 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 ARF1P84077 181 aaKnown RBP12.71□□□□□ -0.37
IRF3-223ENST00000599223 CYLC2Q14093 348 aaPredicted RBP12.71□□□□□ -0.37
IRF3-223ENST00000599223 LARS2Q15031 903 aaKnown RBP12.71□□□□□ -0.37
IRF3-223ENST00000599223 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 PHYHD1Q5SRE7 291 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 C6orf10Q5SRN2 563 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 WDFY1Q8IWB7 410 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 TMEM123Q8N131 208 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 MIER2Q8N344 545 aa12.71□□□□□ -0.37
IRF3-223ENST00000599223 SVOPLQ8N434 492 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms