RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 B3GLCTQ6Y288 498 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 CREB3L2Q70SY1 520 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 LINGO2Q7L985 606 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 KRT73Q86Y46 540 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 PTOV1Q86YD1 416 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 EPHX4Q8IUS5 362 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SMYD1Q8NB12 490 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 MAPK1IP1LQ8NDC0 245 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 TAAR8Q969N4 342 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 ASB9Q96DX5 294 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 HOPXQ9BPY8 73 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 BDH2Q9BUT1 245 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 TRAF4Q9BUZ4 470 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SF3B5Q9BWJ5 86 aaKnown RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SLCO5A1Q9H2Y9 848 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 TMEM38AQ9H6F2 299 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SPAG4Q9NPE6 437 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 SLC17A5Q9NRA2 495 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 CD300AQ9UGN4 299 aa12.06□□□□□ -0.48
SCAF1-203ENST00000598359 LEF1Q9UJU2 399 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 GDF2Q9UK05 429 aaPredicted RBP12.06□□□□□ -0.48
SCAF1-203ENST00000598359 E7EQL1 145 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 FXYD1O00168 92 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 TPST2O60704 377 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 UPK3AO75631 287 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 LGI1O95970 557 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 NPPAP01160 153 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 MPGP29372 298 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 RGS8P57771 180 aaPredicted RBP12.05□□□□□ -0.48
SCAF1-203ENST00000598359 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
SCAF1-203ENST00000598359 TNK1Q13470 666 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 ALG10BQ5I7T1 473 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 OR7E24Q6IFN5 339 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 TMEM108Q6UXF1 575 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 ARMC8Q8IUR7 673 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 HIPK4Q8NE63 616 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 MFSD8Q8NHS3 518 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 SLC35B4Q969S0 331 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 CCDC124Q96CT7 223 aaKnown RBP12.05□□□□□ -0.48
SCAF1-203ENST00000598359 ALKBH3Q96Q83 286 aaPredicted RBP12.05□□□□□ -0.48
SCAF1-203ENST00000598359 CGREF1Q99674 301 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 SPATA5L1Q9BVQ7 753 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 AMBRA1Q9C0C7 1298 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 POU2F3Q9UKI9 436 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 RASD1Q9Y272 281 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 LRRC42Q9Y546 428 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 GMEB1Q9Y692 573 aa12.05□□□□□ -0.48
SCAF1-203ENST00000598359 KIAA1324LA8MWY0 1029 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-203ENST00000598359 H3BNX3 289 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 M0R082 166 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 M0R3H8 397 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ANGPT2O15123 496 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 KRT33AO76009 404 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 IGHV4-39P01824 125 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 HEXAP06865 529 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 GTF2E2P29084 291 aaKnown RBP12.04□□□□□ -0.48
SCAF1-203ENST00000598359 GRPRP30550 384 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ACVR1BP36896 505 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 CLDN17P56750 224 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 IL1RL1Q01638 556 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 NFYCQ13952 458 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 FLOT2Q14254 428 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 OR1Q1Q15612 314 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 CYP51A1Q16850 503 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 CLEC12BQ2HXU8 276 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ZFP1Q6P2D0 407 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 KLHL17Q6TDP4 642 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 DPP10Q8N608 796 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 LSMEM1Q8N8F7 131 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 POMGNT2Q8NAT1 580 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ZNF417Q8TAU3 575 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 NRG4Q8WWG1 115 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 HTRA1Q92743 480 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 DUS3LQ96G46 650 aaKnown RBP12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ZNF607Q96SK3 696 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ZNF587Q96SQ5 575 aaPredicted RBP12.04□□□□□ -0.48
SCAF1-203ENST00000598359 ALG2Q9H553 416 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 PIF1Q9H611 641 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 GID8Q9NWU2 228 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 CORO2BQ9UQ03 480 aa12.04□□□□□ -0.48
SCAF1-203ENST00000598359 A0A096LPE4 126 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 A0A1W2PPZ6 126 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 PRORSD1PA6NEY8 169 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 LRRN3E7EW58 273 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 MFN2O95140 757 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 VAMP5O95183 116 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 HSD17B1P14061 328 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 PTAFRP25105 342 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TUBA1BP68363 451 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TUBA4AP68366 448 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 MS4A2Q01362 244 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TGFBR3Q03167 851 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 VEZF1Q14119 521 aa12.03□□□□□ -0.48
SCAF1-203ENST00000598359 TRIM25Q14258 630 aaKnown RBP12.03□□□□□ -0.48
SCAF1-203ENST00000598359 DUSP7Q16829 419 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms