RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CDH2P19022 906 aaPredicted RBP13.25□□□□□ -0.29
TGFB1-202ENST00000597453 MPGP29372 298 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 FABP6P51161 128 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 HIKESHIQ53FT3 197 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 C8orf82Q6P1X6 216 aaPredicted RBP13.25□□□□□ -0.29
TGFB1-202ENST00000597453 CCDC80Q76M96 950 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 DEPDC4Q8N2C3 294 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 ANKS4BQ8N8V4 417 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 C3orf49Q96BT1 292 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 ZNF583Q96ND8 569 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 CCT8L2Q96SF2 557 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 HOPXQ9BPY8 73 aaPredicted RBP13.25□□□□□ -0.29
TGFB1-202ENST00000597453 RHNO1Q9BSD3 238 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 PIF1Q9H611 641 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 YAE1D1Q9NRH1 226 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 ADPRHL2Q9NX46 363 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 TESQ9UGI8 421 aaKnown RBP13.25□□□□□ -0.29
TGFB1-202ENST00000597453 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
TGFB1-202ENST00000597453 TMEM229AB2RXF0 380 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 M0QX08 132 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 NPIPB7O75200 414 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 FAM107AO95990 144 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 C8BP07358 591 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 SELENOPP49908 381 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 NUDT2P50583 147 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 HOXC5Q00444 222 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 C1orf140Q5VVS0 124 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 ZNF544Q6NX49 715 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 CLEC2AQ6UVW9 174 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 EPHX4Q8IUS5 362 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 ZNF525Q8N782 197 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 LSMEM1Q8N8F7 131 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 POMGNT2Q8NAT1 580 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 OR10H5Q8NGA6 315 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 LRRC37BQ96QE4 947 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 TAPBPLQ9BX59 468 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 SLC13A4Q9UKG4 626 aa13.24□□□□□ -0.29
TGFB1-202ENST00000597453 H7C417 338 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 TLX2O43763 284 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-202ENST00000597453 LGI1O95970 557 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 OPN1SWP03999 348 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 CRYBA2P53672 197 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 RGS8P57771 180 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-202ENST00000597453 PRPS1P60891 318 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 NCALDP61601 193 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 RAB35Q15286 201 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 GKAP1Q5VSY0 366 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-202ENST00000597453 FAM91A1Q658Y4 838 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 TMEM225Q6GV28 225 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 C6orf89Q6UWU4 347 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 CREB3L2Q70SY1 520 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 LINGO2Q7L985 606 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 SLC15A3Q8IY34 581 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 SMYD1Q8NB12 490 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 OR2T12Q8NG77 320 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 GPR32P1Q8NGA4 272 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 RASSF5Q8WWW0 418 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 TAMM41Q96BW9 452 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 ALKBH3Q96Q83 286 aaPredicted RBP13.23□□□□□ -0.29
TGFB1-202ENST00000597453 PTDSS2Q9BVG9 487 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 FKRPQ9H9S5 495 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 CMTM6Q9NX76 183 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 USP22Q9UPT9 525 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 MOKQ9UQ07 419 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
TGFB1-202ENST00000597453 IGHV1-18A0A0C4DH31 117 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 FTCDNL1E5RQL4 147 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 UPK3AO75631 287 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 LY6HO94772 140 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 CD247P20963 164 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 HTR2AP28223 471 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 SLC7A2P52569 658 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 EGR4Q05215 589 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 DUSP7Q16829 419 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 NIPAL3Q6P499 406 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 KLHL24Q6TFL4 600 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 CXXC5Q7LFL8 322 aaKnown RBP13.22□□□□□ -0.29
TGFB1-202ENST00000597453 RANBP3LQ86VV4 465 aaPredicted RBP13.22□□□□□ -0.29
TGFB1-202ENST00000597453 HIPK1Q86Z02 1210 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 KDM8Q8N371 416 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 OR1K1Q8NGR3 316 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 STK35Q8TDR2 534 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 SLC26A7Q8TE54 656 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 NANOS1Q8WY41 292 aaKnown RBP13.22□□□□□ -0.29
TGFB1-202ENST00000597453 BOD1Q96IK1 185 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 ARHGDIGQ99819 225 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 C12orf10Q9HB07 376 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 SEC14L4Q9UDX3 406 aa13.22□□□□□ -0.29
TGFB1-202ENST00000597453 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 ELOA3DA6NLF2 546 aaPredicted RBP13.21□□□□□ -0.29
TGFB1-202ENST00000597453 NME4O00746 187 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 KRT33AO76009 404 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 VAMP5O95183 116 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 AHSA1O95433 338 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 WNT11O96014 354 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 PNMTP11086 282 aa13.21□□□□□ -0.29
TGFB1-202ENST00000597453 APOBEC3AP31941 199 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms