RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 ZNF814B7Z6K7 855 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 DLGAP1O14490 977 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 MT-ATP6P00846 226 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ASAH2BP0C7U1 165 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 TMIGD3P0DMS9 266 aaPredicted RBP13.37□□□□□ -0.27
TRIM28-207ENST00000597136 RAC3P60763 192 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF239Q16600 458 aaKnown RBP13.37□□□□□ -0.27
TRIM28-207ENST00000597136 OAFQ86UD1 273 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 SLC25A36Q96CQ1 311 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 PRRG4Q9BZD6 226 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 FKRPQ9H9S5 495 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 RNF122Q9H9V4 155 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 REV1Q9UBZ9 1251 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF229Q9UJW7 825 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ORC6Q9Y5N6 252 aa13.37□□□□□ -0.27
TRIM28-207ENST00000597136 ABCA4P78363 2273 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 FAM90A27PA6NNH2 459 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 HSPB2A8KAH6 182 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 FZD7O75084 574 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 PTP4A3O75365 173 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 SYNGR4O95473 234 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 PMS2P2O95744 297 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
TRIM28-207ENST00000597136 BMP5P22003 454 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 CTSSP25774 331 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 CHRNB4P30926 498 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 SLC9A3P48764 834 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 IL1RL1Q01638 556 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 FHL1Q13642 323 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 OR7A5Q15622 319 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 HSPB2Q16082 182 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 RASSF6Q6ZTQ3 369 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 MAMDC2Q7Z304 686 aaPredicted RBP13.36□□□□□ -0.27
TRIM28-207ENST00000597136 CCDC103Q8IW40 242 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 PARP8Q8N3A8 854 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 RELL2Q8NC24 303 aaPredicted RBP13.36□□□□□ -0.27
TRIM28-207ENST00000597136 OR13C2Q8NGS9 318 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 CA5BP1Q8WTZ4 195 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 PAQR5Q9NXK6 330 aaPredicted RBP13.36□□□□□ -0.27
TRIM28-207ENST00000597136 SIGLEC7Q9Y286 467 aa13.36□□□□□ -0.27
TRIM28-207ENST00000597136 ANKHD1Q8IWZ3 2542 aaKnown RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TRAV27A0A087WT01 109 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 H0YJX3 145 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 SMAD9O15198 467 aaKnown RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 RAMP1O60894 148 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TNFSF13O75888 250 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 CLDN14O95500 239 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 SNAP29O95721 258 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 HIST1H2ABP04908 130 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 OSMP13725 252 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 AGAP20933 346 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 COL8A1P27658 744 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 GRNP28799 593 aaKnown RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 GRPRP30550 384 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 RAD23AP54725 363 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 AQP4P55087 323 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 OR2B6P58173 313 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 MFSD13AQ14CX5 517 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 RFX4Q33E94 735 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 ZBED5Q49AG3 693 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 HIST2H2BCQ6DN03 193 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 VWA1Q6PCB0 445 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 IZUMO2Q6UXV1 221 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 HIST3H2AQ7L7L0 130 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 KIF18BQ86Y91 864 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 OR51A7Q8NH64 312 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 ABHD3Q8WU67 409 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 HIST1H2ACQ93077 130 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF775Q96BV0 537 aaPredicted RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 RDH12Q96NR8 316 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TAPBPLQ9BX59 468 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TOR3AQ9H497 397 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 TIGARQ9NQ88 270 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 SMPD3Q9NY59 655 aaPredicted RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
TRIM28-207ENST00000597136 CORINQ9Y5Q5 1042 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 ITPR2Q14571 2701 aa13.35□□□□□ -0.27
TRIM28-207ENST00000597136 A0A1W2PNV4 684 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 M0R082 166 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 SOX14O95416 240 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 IGFBP1P08833 259 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 TSPAN19P0C672 248 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 CDH2P19022 906 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 POLR2IP36954 125 aaKnown RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 FXYD6P3P58550 94 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 RPS4XP62701 263 aaKnown RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 CSNK2A1P68400 391 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 SIRPAP78324 504 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 SLC35A1P78382 337 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 ZIK1Q3SY52 487 aaPredicted RBP13.34□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF620Q6ZNG0 422 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 FCRLAQ7L513 359 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 CNEP1R1Q8N9A8 125 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 ZNF417Q8TAU3 575 aa13.34□□□□□ -0.27
TRIM28-207ENST00000597136 CPNE4Q96A23 557 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms