RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SYNDIG1LA6NDD5 238 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 H0YGG7 62 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 H7C417 338 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 XRCC3O43542 346 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 EML2O95834 649 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 APODP05090 189 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 CSF1P09603 554 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 GABRA1P14867 456 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
VRK3-209ENST00000594948 MAP2K6P52564 334 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 ARF3P61204 181 aaPredicted RBP12.1□□□□□ -0.47
VRK3-209ENST00000594948 PSG6Q00889 435 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 SSBP1Q04837 148 aaKnown RBP12.1□□□□□ -0.47
VRK3-209ENST00000594948 NDUFAF6Q330K2 333 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 PRRT3Q5FWE3 981 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 TMEM81Q6P7N7 255 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 TMUB2Q71RG4 321 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 RNF44Q7L0R7 432 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 EXD3Q8N9H8 876 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 LIPHQ8WWY8 451 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 GCDHQ92947 438 aaPredicted RBP12.1□□□□□ -0.47
VRK3-209ENST00000594948 NMNAT3Q96T66 252 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 CCDC86Q9H6F5 360 aaKnown RBP12.1□□□□□ -0.47
VRK3-209ENST00000594948 MED11Q9P086 117 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 MTFP1Q9UDX5 166 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 OPN4Q9UHM6 478 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 LRP4O75096 1905 aa12.1□□□□□ -0.47
VRK3-209ENST00000594948 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 UPK3AO75631 287 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 RBBP9O75884 186 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 FGF2P09038 288 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 CSRP1P21291 193 aaKnown RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 FCARP24071 287 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 DCTDP32321 178 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 WASP42768 502 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ZNF227Q86WZ6 799 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 SERPINA12Q8IW75 414 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ZNF440Q8IYI8 595 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ZNF614Q8N883 585 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR5AK2Q8NH90 309 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ZNF417Q8TAU3 575 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 LINC00052Q96N35 136 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 SMAD5Q99717 465 aaKnown RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 ALG12Q9BV10 488 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 SCML1Q9UN30 329 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 MRPS2Q9Y399 296 aaKnown RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 ADAM18Q9Y3Q7 739 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 BRCA2P51587 3418 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 A6NCN8 305 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ZNF860A6NHJ4 632 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 C5orf67F2Z3F1 127 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 VSIG10L2P0DP72 767 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 ADRA2CP18825 462 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 S1PR1P21453 382 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 GK2Q14410 553 aaPredicted RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 UBXN2BQ14CS0 331 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 CSRP2Q16527 193 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 IQCF2Q8IXL9 164 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR2AK2Q8NG84 335 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR6M1Q8NGM8 313 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR6K6Q8NGW6 343 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR6N1Q8NGY5 312 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 BAHD1Q8TBE0 780 aaPredicted RBP12.09□□□□□ -0.47
VRK3-209ENST00000594948 DOK4Q8TEW6 326 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OIT3Q8WWZ8 545 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 OR1E3Q8WZA6 343 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 FGF13Q92913 245 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 G6PC3Q9BUM1 346 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 C12orf4Q9NQ89 552 aa12.09□□□□□ -0.47
VRK3-209ENST00000594948 FAM221BA6H8Z2 402 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 TTLL8A6PVC2 850 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 PRR32B1ATL7 298 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 F5H5P2 479 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 PYCARD-AS1I3L0S3 204 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 ZNF254O75437 659 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 ABHD16AO95870 558 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 WDPCPO95876 746 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 TXNDC12O95881 172 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 IGKV1D-16P01601 117 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 MELTFP08582 738 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 SDHBP21912 280 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 CLDN12P56749 244 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 GMFBP60983 142 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 MAT1AQ00266 395 aaKnown RBP12.08□□□□□ -0.48
VRK3-209ENST00000594948 LTBQ06643 244 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 NFATC4Q14934 902 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 TOMM20Q15388 145 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 TFAP2EQ6VUC0 442 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 PRSS41Q7RTY9 318 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 KRT77Q7Z794 578 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 SDR16C5Q8N3Y7 309 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 OR14C36Q8NHC7 312 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 CCDC74AQ96AQ1 378 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 ALX4Q9H161 411 aaPredicted RBP12.08□□□□□ -0.48
VRK3-209ENST00000594948 SLC17A5Q9NRA2 495 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 GDE1Q9NZC3 331 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 STEAP1Q9UHE8 339 aa12.08□□□□□ -0.48
VRK3-209ENST00000594948 MRM2Q9UI43 246 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms