RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 AKAP8O43823 692 aaKnown RBP20.48■□□□□ 0.87
LSM4-204ENST00000594828 C8BP07358 591 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 BMP4P12644 408 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 HOXB1P14653 301 aaPredicted RBP20.48■□□□□ 0.87
LSM4-204ENST00000594828 NQO1P15559 274 aaKnown RBP20.48■□□□□ 0.87
LSM4-204ENST00000594828 NUDT6P53370 316 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 CHRNB3Q05901 458 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 MS4A18Q3C1V0 323 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 SLC30A8Q8IWU4 369 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 UEVLDQ8IX04 471 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 GPR137CQ8N3F9 429 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 ADPRHL1Q8NDY3 354 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 SLC41A3Q96GZ6 507 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 SLC38A2Q96QD8 506 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 MCHR1Q99705 422 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 KCNS3Q9BQ31 491 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 RHNO1Q9BSD3 238 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 ASPNQ9BXN1 380 aa20.48■□□□□ 0.87
LSM4-204ENST00000594828 KAT8Q9H7Z6 458 aaKnown RBP20.48■□□□□ 0.87
LSM4-204ENST00000594828 HEATR1Q9H583 2144 aaKnown RBP20.48■□□□□ 0.87
LSM4-204ENST00000594828 M0R3H8 397 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 FMO6PO60774 539 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 BGLAPP02818 100 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 OPN1SWP03999 348 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 ARF1P84077 181 aaKnown RBP20.47■□□□□ 0.87
LSM4-204ENST00000594828 SWT1Q5T5J6 900 aaKnown RBP20.47■□□□□ 0.87
LSM4-204ENST00000594828 C10orf53Q8N6V4 93 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 PIK3C3Q8NEB9 887 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 OR2M2Q96R28 347 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 ARHGDIGQ99819 225 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 TMEM43Q9BTV4 400 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 TMEM120AQ9BXJ8 343 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 GPR35Q9HC97 309 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 NAV3Q8IVL0 2385 aa20.47■□□□□ 0.87
LSM4-204ENST00000594828 H7C417 338 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 TRAF3IP2O43734 574 aaPredicted RBP20.46■□□□□ 0.87
LSM4-204ENST00000594828 HPRP00739 348 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 CRYAAP02489 173 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 TUBA1BP68363 451 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 TUBA4AP68366 448 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 KRTAP1-1Q07627 177 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 PMS2P3Q13401 168 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 ZNF613Q6PF04 617 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 TUBA1AQ71U36 451 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 PATL1Q86TB9 770 aaKnown RBP20.46■□□□□ 0.87
LSM4-204ENST00000594828 SCAIQ8N9R8 606 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 GPR32P1Q8NGA4 272 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 OR10A6Q8NH74 314 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 HTRA1Q92743 480 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 MOGAT1Q96PD6 335 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 NELFAQ9H3P2 528 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 CRLF2Q9HC73 371 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 MOV10Q9HCE1 1003 aaKnown RBP20.46■□□□□ 0.87
LSM4-204ENST00000594828 PMF1-BGLAPU3KQ54 211 aa20.46■□□□□ 0.87
LSM4-204ENST00000594828 FN1P02751 2386 aaKnown RBP20.45■□□□□ 0.86
LSM4-204ENST00000594828 HLA-DOBP13765 273 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 DSCR9P59020 149 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 CYLC2Q14093 348 aaPredicted RBP20.45■□□□□ 0.86
LSM4-204ENST00000594828 CEACAM16Q2WEN9 425 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 C3orf36Q3SXR2 165 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 TMEM123Q8N131 208 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 OR6T1Q8NGN1 323 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 SLC26A7Q8TE54 656 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 ZNF837Q96EG3 531 aaPredicted RBP20.45■□□□□ 0.86
LSM4-204ENST00000594828 KATNB1Q9BVA0 655 aa20.45■□□□□ 0.86
LSM4-204ENST00000594828 MRPL39Q9NYK5 338 aaKnown RBP20.45■□□□□ 0.86
LSM4-204ENST00000594828 CRNNQ9UBG3 495 aaPredicted RBP20.45■□□□□ 0.86
LSM4-204ENST00000594828 NSD1Q96L73 2696 aaPredicted RBP20.44■□□□□ 0.86
LSM4-204ENST00000594828 FBP2O00757 339 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 CHP2O43745 196 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 TP53P04637 393 aaPredicted RBP20.44■□□□□ 0.86
LSM4-204ENST00000594828 PCGF2P35227 344 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 POU3F1Q03052 451 aaPredicted RBP20.44■□□□□ 0.86
LSM4-204ENST00000594828 NPTX1Q15818 432 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 ENTPD8Q5MY95 495 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 INTS11Q5TA45 600 aaKnown RBP20.44■□□□□ 0.86
LSM4-204ENST00000594828 CARD17Q5XLA6 110 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 CLEC2AQ6UVW9 174 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 LINC00114Q6XXX2 140 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 FAM169BQ8N8A8 192 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 OR10H5Q8NGA6 315 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 FBXO17Q96EF6 278 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 EMC6Q9BV81 110 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 NOX1Q9Y5S8 564 aa20.44■□□□□ 0.86
LSM4-204ENST00000594828 IGHV4-30-2A0A087WSY4 118 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 CPSF4LA6NMK7 179 aaKnown RBP20.43■□□□□ 0.86
LSM4-204ENST00000594828 LRRN3E7EW58 273 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 M0R3G1 203 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 CECR9P0C854 216 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 TROVE2P10155 538 aaKnown RBP eCLIP20.43■□□□□ 0.86
LSM4-204ENST00000594828 CBR1P16152 277 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 NAAAQ02083 359 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 PUDPQ08623 228 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 VMACQ2NL98 169 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 TRMT5Q32P41 509 aaKnown RBP20.43■□□□□ 0.86
LSM4-204ENST00000594828 NANOGP8Q6NSW7 305 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 RBM45Q8IUH3 476 aaKnown RBP20.43■□□□□ 0.86
LSM4-204ENST00000594828 C20orf196Q8IYI0 205 aa20.43■□□□□ 0.86
LSM4-204ENST00000594828 VANGL1Q8TAA9 524 aaPredicted RBP20.43■□□□□ 0.86
LSM4-204ENST00000594828 SH3GL1Q99961 368 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms