RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CCDC157Q569K6 752 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 ELP2Q6IA86 826 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 DHRS7BQ6IAN0 325 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 HEPHL1Q6MZM0 1159 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 DGAT2L6Q6ZPD8 337 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 BEND4Q6ZU67 534 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 PRICKLE2Q7Z3G6 844 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 TMEM17Q86X19 198 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 SPICQ8N5J4 248 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 METTL27Q8N6F8 245 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 IQCF1Q8N6M8 205 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 C7orf50Q9BRJ6 194 aaKnown RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 SEBOXQ9HB31 216 aaPredicted RBP14.09□□□□□ -0.15
PNKP-204ENST00000594661 NLGN3Q9NZ94 848 aa14.09□□□□□ -0.15
PNKP-204ENST00000594661 IGHV1OR21-1A0A087WYE8 117 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TRBV23-1A0A0A0MS06 115 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TMEM129A0AVI4 362 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 CPSF4LA6NMK7 179 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 PITPNBP48739 271 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 CFHR1Q03591 330 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 EXOSC7Q15024 291 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 NDUFA9Q16795 377 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 LYSMD4Q5XG99 296 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 ARIH2OSQ8N7S6 290 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 BPIFCQ8NFQ6 507 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 ZDHHC12Q96GR4 267 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 PEX11GQ96HA9 241 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 ARHGDIGQ99819 225 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 RAB33BQ9H082 229 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 SLC25A32Q9H2D1 315 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 PDE7BQ9NP56 450 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 PPP1R14DQ9NXH3 145 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TESQ9UGI8 421 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 MRTO4Q9UKD2 239 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 CBLCQ9ULV8 474 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 SHISA3A0PJX4 238 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TGFBR3LH3BV60 316 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 NUDT21O43809 227 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 RAD1O60671 282 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 PRAF2O60831 178 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 CDC123O75794 336 aaPredicted RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 AQP8O94778 261 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 SIX6O95475 246 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 RAP2BP61225 183 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 DCDP81605 110 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 AMZ1Q400G9 498 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 C1orf94Q6P1W5 598 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 CD300LDQ6UXZ3 194 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 FRRS1Q6ZNA5 592 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TMUB2Q71RG4 321 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 OAFQ86UD1 273 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 MEX3DQ86XN8 651 aaKnown RBP14.08□□□□□ -0.16
PNKP-204ENST00000594661 LDLRAD3Q86YD5 345 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 GPR135Q8IZ08 494 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TCEANCQ8N8B7 351 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 ORAI1Q96D31 301 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 GPA33Q99795 319 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 CRB3Q9BUF7 120 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 POLE3Q9NRF9 147 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 KLHL28Q9NXS3 571 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 TVP23BQ9NYZ1 205 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 RPS6KB2Q9UBS0 482 aa14.08□□□□□ -0.16
PNKP-204ENST00000594661 A0A087WV62 115 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 ZNF729A6NN14 1252 aaPredicted RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 LRRTM2O43300 516 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 NSA2O95478 260 aaKnown RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 AGR2O95994 175 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 RNH1P13489 461 aaKnown RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 SRP9P49458 86 aaKnown RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 ZXDAP98168 799 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 LGALS3BPQ08380 585 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 FAM53BQ14153 422 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 ERV3-1Q14264 604 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 FAM74A1Q5RGS3 127 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 AVPI1Q5T686 147 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 PXT1Q8NFP0 134 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 OR8J1Q8NGP2 316 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 ELF4Q99607 663 aaPredicted RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 MED11Q9P086 117 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
PNKP-204ENST00000594661 VPS13AQ96RL7 3174 aa14.07□□□□□ -0.16
PNKP-204ENST00000594661 A0A087WUU8 490 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 A0A1B0GTQ1 180 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 OR2W5A6NFC9 320 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TTLL8A6PVC2 850 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 HMSDA8MTL9 139 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 PEX14O75381 377 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TDGF1P13385 188 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 HOXA6P31267 233 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 CSF2RBP32927 897 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 RGS8P57771 180 aaPredicted RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 GINS1Q14691 196 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TRAM2Q15035 370 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 TEX30Q5JUR7 227 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 EXOSC6Q5RKV6 272 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 PRPF38BQ5VTL8 546 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 SLC30A6Q6NXT4 461 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 BCDIN3DQ7Z5W3 292 aaKnown RBP14.06□□□□□ -0.16
PNKP-204ENST00000594661 SLITRK4Q8IW52 837 aa14.06□□□□□ -0.16
PNKP-204ENST00000594661 FAM71CQ8NEG0 241 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms