RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PPIBP23284 216 aaKnown RBP12.81□□□□□ -0.36
PNKP-202ENST00000593706 PAX7P23759 505 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 SELENOPP49908 381 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 PPOXP50336 477 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 NAAAQ02083 359 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 BNIP2Q12982 314 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 LARS2Q15031 903 aaKnown RBP12.81□□□□□ -0.36
PNKP-202ENST00000593706 ADIPOQQ15848 244 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 GCNT6Q5T4J0 391 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 LIPNQ5VXI9 398 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 SERPINA11Q86U17 422 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 RAB1BQ9H0U4 201 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 PIF1Q9H611 641 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 CACYBPQ9HB71 228 aaKnown RBP12.81□□□□□ -0.36
PNKP-202ENST00000593706 IFT52Q9Y366 437 aa12.81□□□□□ -0.36
PNKP-202ENST00000593706 A0A096LPE4 126 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 A0A0G2JND7 137 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 A0A1W2PPZ6 126 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 OR6C65A6NJZ3 312 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 A8MVM7 634 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 FZD7O75084 574 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 NPIPB7O75200 414 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 VAMP5O95183 116 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 CECR9P0C854 216 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 GTF2E2P29084 291 aaKnown RBP12.8□□□□□ -0.36
PNKP-202ENST00000593706 PRKAR1BP31321 381 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 IDH3GP51553 393 aaPredicted RBP12.8□□□□□ -0.36
PNKP-202ENST00000593706 EFNB3Q15768 340 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 CR1LQ2VPA4 569 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 RUNDC3AQ59EK9 446 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 METTL21CQ5VZV1 264 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 CREB3L2Q70SY1 520 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 NFKBIDQ8NI38 313 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 TSPEARQ8WU66 669 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 BOD1Q96IK1 185 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 ZNF317Q96PQ6 595 aaPredicted RBP12.8□□□□□ -0.36
PNKP-202ENST00000593706 MOV10Q9HCE1 1003 aaKnown RBP12.8□□□□□ -0.36
PNKP-202ENST00000593706 FBXO9Q9UK97 447 aaPredicted RBP12.8□□□□□ -0.36
PNKP-202ENST00000593706 TRIM33Q9UPN9 1127 aa12.8□□□□□ -0.36
PNKP-202ENST00000593706 ARPC4-TTLL3A0A0A6YYG9 625 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 LRP5LA4QPB2 252 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 TMEM247A6NEH6 219 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 hCG_2039718K7EN88 272 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 AHSA1O95433 338 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 DAOP14920 347 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 CHN2P52757 468 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 SH3BGRP55822 239 aaPredicted RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 PCBP3P57721 371 aaKnown RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 CDK6Q00534 326 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 ROR2Q01974 943 aaKnown RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 SELPLGQ14242 412 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 ZNF311Q5JNZ3 666 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 REEP3Q6NUK4 255 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 ANKRD16Q6P6B7 361 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 DHRS4L2Q6PKH6 230 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 C6orf89Q6UWU4 347 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 DHDDSQ86SQ9 333 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 OR4F15Q8NGB8 312 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 BCL2L2Q92843 193 aaPredicted RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 TMEM120AQ9BXJ8 343 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 PLK3Q9H4B4 646 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 CCDC134Q9H6E4 229 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 DYNLRB1Q9NP97 96 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 FGFR1OP2Q9NVK5 253 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 CRNNQ9UBG3 495 aaPredicted RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 LEF1Q9UJU2 399 aaPredicted RBP12.79□□□□□ -0.36
PNKP-202ENST00000593706 CORO2BQ9UQ03 480 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 RASD1Q9Y272 281 aa12.79□□□□□ -0.36
PNKP-202ENST00000593706 VSTM5A8MXK1 200 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 FBP2O00757 339 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 APEX1P27695 318 aaKnown RBP12.78□□□□□ -0.36
PNKP-202ENST00000593706 HTR2AP28223 471 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 CALCRP30988 508 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 SRP14P37108 136 aaKnown RBP12.78□□□□□ -0.36
PNKP-202ENST00000593706 P2RY4P51582 365 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 HOXC5Q00444 222 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 C3orf36Q3SXR2 165 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 LINGO2Q7L985 606 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 NET1Q7Z628 596 aaPredicted RBP12.78□□□□□ -0.36
PNKP-202ENST00000593706 SVOPLQ8N434 492 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 MAGEE2Q8TD90 523 aaPredicted RBP12.78□□□□□ -0.36
PNKP-202ENST00000593706 SLC25A36Q96CQ1 311 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 ANKRD27Q96NW4 1050 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 CGREF1Q99674 301 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 SOX7Q9BT81 388 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 ARMC7Q9H6L4 198 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.78□□□□□ -0.36
PNKP-202ENST00000593706 ZNF232Q9UNY5 417 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 NDUFAF1Q9Y375 327 aa12.78□□□□□ -0.36
PNKP-202ENST00000593706 WNK2Q9Y3S1 2297 aa12.77□□□□□ -0.36
PNKP-202ENST00000593706 SH3PXD2BA1X283 911 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 C5orf58C9J3I9 102 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 FTCDNL1E5RQL4 147 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 FXYD1O00168 92 aa12.77□□□□□ -0.37
PNKP-202ENST00000593706 TCF21O43680 179 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms