RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 IQCCQ4KMZ1 466 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 C5orf46Q6UWT4 87 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 MIER2Q8N344 545 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 GPR137CQ8N3F9 429 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 GPR35Q9HC97 309 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 RPS6KB2Q9UBS0 482 aa20.74■□□□□ 0.91
LSM4-202ENST00000593564 M0R082 166 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 CLIC1O00299 241 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 CELA3BP08861 270 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 C1DQ13901 141 aaKnown RBP20.73■□□□□ 0.91
LSM4-202ENST00000593564 FAM69AQ5T7M9 428 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 MYPOPQ86VE0 399 aaPredicted RBP20.73■□□□□ 0.91
LSM4-202ENST00000593564 LSMEM1Q8N8F7 131 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 ZNF417Q8TAU3 575 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 SLC38A4Q969I6 547 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 TAAR8Q969N4 342 aa20.73■□□□□ 0.91
LSM4-202ENST00000593564 ZNF587Q96SQ5 575 aaPredicted RBP20.73■□□□□ 0.91
LSM4-202ENST00000593564 LOC102725191A0A1B0GVB3 256 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 VSTM5A8MXK1 200 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 C5orf58C9J3I9 102 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 hCG_2039718K7EN88 272 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 STAMBPO95630 424 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 ETS2P15036 469 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 HOXB9P17482 250 aaPredicted RBP20.72■□□□□ 0.91
LSM4-202ENST00000593564 NPR2P20594 1047 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 HNF1AP20823 631 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 PRKAR1BP31321 381 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 THBS4P35443 961 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 ARR3P36575 388 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 CEACAM16Q2WEN9 425 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 SLC2A7Q6PXP3 512 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 IL17RELQ6ZVW7 336 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 CCDC36Q8IYA8 594 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 PIK3C3Q8NEB9 887 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 ANKRD27Q96NW4 1050 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 OR2M2Q96R28 347 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 DOK1Q99704 481 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 RSPO3Q9BXY4 272 aaPredicted RBP20.72■□□□□ 0.91
LSM4-202ENST00000593564 CRLF2Q9HC73 371 aa20.72■□□□□ 0.91
LSM4-202ENST00000593564 IGKV1D-42A0A075B6H8 117 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 TRAV36DV7A0A075B6V5 113 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 IGHV2OR16-5A0A0B4J2B6 119 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 A0A1B0GWA3 101 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 ZNF503-AS2A6NEH8 195 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 TRAF3IP2O43734 574 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 AKAP8O43823 692 aaKnown RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 ERCC1P07992 297 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 GIFP27352 417 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 HTR2AP28223 471 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 H1FNTQ75WM6 255 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 NET1Q7Z628 596 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 TMEM123Q8N131 208 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 ADPRHL1Q8NDY3 354 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 DNAJA4Q8WW22 397 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 NEU4Q8WWR8 484 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 ZNF837Q96EG3 531 aaPredicted RBP20.71■□□□□ 0.91
LSM4-202ENST00000593564 NKIRAS1Q9NYS0 192 aa20.71■□□□□ 0.91
LSM4-202ENST00000593564 NBEAL1Q6ZS30 2694 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 ZNF99A8MXY4 864 aaPredicted RBP20.7■□□□□ 0.9
LSM4-202ENST00000593564 TGFAP01135 160 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 DAOP14920 347 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 GRPRP30550 384 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 NPRL3Q12980 569 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 DHRS4L2Q6PKH6 230 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 SPATA21Q7Z572 469 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 MDP1Q86V88 176 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 SVOPLQ8N434 492 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 GOLGA6L1Q8N7Z2 621 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 IL17RDQ8NFM7 739 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 C19orf24Q9BVV8 132 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 KLHL14Q9P2G3 628 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 USP22Q9UPT9 525 aa20.7■□□□□ 0.9
LSM4-202ENST00000593564 TMEM129A0AVI4 362 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 ARAFP10398 606 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 MRPL19P49406 292 aaKnown RBP20.69■□□□□ 0.9
LSM4-202ENST00000593564 MFSD13AQ14CX5 517 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 ALG10BQ5I7T1 473 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 GCNT6Q5T4J0 391 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 COMTD1Q86VU5 262 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 SOX7Q9BT81 388 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 SLC25A37Q9NYZ2 338 aa20.69■□□□□ 0.9
LSM4-202ENST00000593564 TACSTD2P09758 323 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 MAGOHP61326 146 aaKnown RBP20.68■□□□□ 0.9
LSM4-202ENST00000593564 IL1RL1Q01638 556 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 LRIF1Q5T3J3 769 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 FAM91A1Q658Y4 838 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 ULK3Q6PHR2 472 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 EPGNQ6UW88 154 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 UEVLDQ8IX04 471 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 MSRB3Q8IXL7 192 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 ZCCHC24Q8N2G6 241 aaKnown RBP20.68■□□□□ 0.9
LSM4-202ENST00000593564 OR6S1Q8NH40 331 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 NFKBIDQ8NI38 313 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 HPS1Q92902 700 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 SLC41A3Q96GZ6 507 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 NOX3Q9HBY0 568 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 CORINQ9Y5Q5 1042 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 USH1CQ9Y6N9 552 aa20.68■□□□□ 0.9
LSM4-202ENST00000593564 LRP5LA4QPB2 252 aa20.67■□□□□ 0.9
LSM4-202ENST00000593564 MS4A18H0YCH9 400 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms