RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 CLCA1A8K7I4 914 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 KDM4EB2RXH2 506 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 H3BML4 177 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 M0R3G1 203 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 PLPP3O14495 311 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 FAM20BO75063 409 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 ENTPD6O75354 484 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TRAPPC6AO75865 159 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 OR6A2O95222 327 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 IFNGP01579 166 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TCEA1P23193 301 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 EEF1B2P24534 225 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 GDF1P27539 372 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 MEOX1P50221 254 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 CTXN1P60606 82 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 MYBPHQ13203 477 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 PMS2P3Q13401 168 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TOMM20Q15388 145 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 OR7A5Q15622 319 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZNF239Q16600 458 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 TMEM176BQ3YBM2 270 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 AADACL4Q5VUY2 407 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TMPPEQ6ZT21 453 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 H1FNTQ75WM6 255 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 YRDCQ86U90 279 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZFP62Q8NB50 900 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZNF540Q8NDQ6 660 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 FAM83FQ8NEG4 500 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 OR14L1PQ8NHC6 308 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TM9SF4Q92544 642 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 LRR1Q96L50 414 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TTTY12Q9BZ98 90 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 ZNF703Q9H7S9 590 aaPredicted RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 FKBP14Q9NWM8 211 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 PSORS1C1Q9UIG5 152 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 KLHL21Q9UJP4 597 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 B3GALT5Q9Y2C3 310 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 PCDHGA9Q9Y5G4 932 aaKnown RBP12.09□□□□□ -0.47
VMP1-217ENST00000593168 IER3IP1Q9Y5U9 82 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 CELSR2Q9HCU4 2923 aa12.09□□□□□ -0.47
VMP1-217ENST00000593168 TEP1Q99973 2627 aaKnown RBP12.08□□□□□ -0.47
VMP1-217ENST00000593168 CRYBG3Q68DQ2 2970 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 TRAV17A0A0B4J275 112 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 PTGES3LE9PB15 166 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 M0R082 166 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 PRODHO43272 600 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 SLC2A10O95528 541 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 PMS2P2O95744 297 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 TXNDC12O95881 172 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 CLPTM1O96005 669 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ADORA3P0DMS8 318 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 COL8A1P27658 744 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 NOS3P29474 1203 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 SLC15A1P46059 708 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 CDH15P55291 814 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 SLC35A1P78382 337 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ITGADQ13349 1161 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 NADK2Q4G0N4 442 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 GXYLT1Q4G148 440 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 EMC4Q5J8M3 183 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 NXNL2Q5VZ03 156 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 GPR139Q6DWJ6 353 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ZNF773Q6PK81 442 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 IGFL3Q6UXB1 125 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 TMEM251Q8N6I4 163 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ADPRHL1Q8NDY3 354 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ZNF417Q8TAU3 575 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 GGHQ92820 318 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 RFKQ969G6 155 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 SFXN2Q96NB2 322 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 ZNF582Q96NG8 517 aaPredicted RBP12.08□□□□□ -0.48
VMP1-217ENST00000593168 ZNF587Q96SQ5 575 aaPredicted RBP12.08□□□□□ -0.48
VMP1-217ENST00000593168 KATNB1Q9BVA0 655 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 TMEM185BQ9H7F4 350 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 CHST11Q9NPF2 352 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 HINT3Q9NQE9 182 aaKnown RBP12.08□□□□□ -0.48
VMP1-217ENST00000593168 BATF3Q9NR55 127 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 INIPQ9NRY2 104 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 CNOT2Q9NZN8 540 aaKnown RBP12.08□□□□□ -0.48
VMP1-217ENST00000593168 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 GPR52Q9Y2T5 361 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
VMP1-217ENST00000593168 CREBBPQ92793 2442 aa12.08□□□□□ -0.48
VMP1-217ENST00000593168 FREM3P0C091 2139 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 ESPL1Q14674 2120 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 LRBAP50851 2863 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 A0A1W2PNR3 127 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 EFCAB10A6NFE3 127 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 MS4A18H0YCH9 400 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 PIPP12273 146 aaPredicted RBP12.07□□□□□ -0.48
VMP1-217ENST00000593168 ATP6V1B1P15313 513 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 ZNF3P17036 446 aa12.07□□□□□ -0.48
VMP1-217ENST00000593168 SHC1P29353 583 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms