RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HTRA1Q92743 480 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 MAL2Q969L2 176 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 SLC47A1Q96FL8 570 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 SLC41A3Q96GZ6 507 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 LRR1Q96L50 414 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 EPYCQ99645 322 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 CCDC28BQ9BUN5 200 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 BEX2Q9BXY8 128 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 NELFAQ9H3P2 528 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 TMEM38AQ9H6F2 299 aa16.4■□□□□ 0.22
CCDC43-205ENST00000592333 TESQ9UGI8 421 aaKnown RBP16.4■□□□□ 0.22
CCDC43-205ENST00000592333 RNF212BA8MTL3 300 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 ERCC1P07992 297 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-205ENST00000592333 OR4A8P0C604 315 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 IGHV4-31P0DP07 118 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 GPX2P18283 190 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 POU3F1Q03052 451 aaPredicted RBP16.39■□□□□ 0.21
CCDC43-205ENST00000592333 C1DQ13901 141 aaKnown RBP16.39■□□□□ 0.21
CCDC43-205ENST00000592333 ALG10BQ5I7T1 473 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 GCNT6Q5T4J0 391 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 SWT1Q5T5J6 900 aaKnown RBP16.39■□□□□ 0.21
CCDC43-205ENST00000592333 SNX32Q86XE0 403 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 ANKRD27Q96NW4 1050 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 SORCS2Q96PQ0 1159 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF607Q96SK3 696 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 SHARPINQ9H0F6 387 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 RAB1BQ9H0U4 201 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 GPR35Q9HC97 309 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 SLC25A37Q9NYZ2 338 aa16.39■□□□□ 0.21
CCDC43-205ENST00000592333 A0A087WUJ7 227 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 A0A1B0GWA3 101 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 LMX1BO60663 402 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 SERPINB7O75635 380 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 IDH3GP51553 393 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-205ENST00000592333 CDK6Q00534 326 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 LGALS3BPQ08380 585 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF627Q7L945 461 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 SLC46A3Q7Z3Q1 461 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 FUNDC1Q8IVP5 155 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 KDM8Q8N371 416 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 NEU4Q8WWR8 484 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-205ENST00000592333 TAAR8Q969N4 342 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 SPDL1Q96EA4 605 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 DENND2DQ9H6A0 471 aaPredicted RBP16.38■□□□□ 0.21
CCDC43-205ENST00000592333 SELENONQ9NZV5 590 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 USP22Q9UPT9 525 aa16.38■□□□□ 0.21
CCDC43-205ENST00000592333 A0A096LPE4 126 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 TRBV5-3A0A0A0MS03 114 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 A0A1W2PPZ6 126 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF99A8MXY4 864 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-205ENST00000592333 EVPLLA8MZ36 301 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 M0R082 166 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 NR5A2O00482 541 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 SLC6A2P23975 617 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 ATP4BP51164 291 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 ARF1P84077 181 aaKnown RBP16.37■□□□□ 0.21
CCDC43-205ENST00000592333 HOXC5Q00444 222 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 BEND6Q5SZJ8 279 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-205ENST00000592333 AGBL2Q5U5Z8 902 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 FAM166AQ6J272 317 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 MSRB3Q8IXL7 192 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 TMEM123Q8N131 208 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF417Q8TAU3 575 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 STON2Q8WXE9 905 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 OR2M2Q96R28 347 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 ZNF587Q96SQ5 575 aaPredicted RBP16.37■□□□□ 0.21
CCDC43-205ENST00000592333 TMEM27Q9HBJ8 222 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 CRLF2Q9HC73 371 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 SLC52A3Q9NQ40 469 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 KLHL14Q9P2G3 628 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 KCNS2Q9ULS6 477 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 NOX1Q9Y5S8 564 aa16.37■□□□□ 0.21
CCDC43-205ENST00000592333 IGKV1D-42A0A075B6H8 117 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 A0A0B4J2E0 115 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 A0A1B0GX12 115 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 TRAF3IP2O43734 574 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-205ENST00000592333 FMO6PO60774 539 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 NPR2P20594 1047 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 GIFP27352 417 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 HTR2AP28223 471 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 GRPRP30550 384 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 CALCRP30988 508 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 EVX1P49640 407 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 IDH3AP50213 366 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 NCALDP61601 193 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 CEACAM16Q2WEN9 425 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 UGT2A3Q6UWM9 527 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 UEVLDQ8IX04 471 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 NFKBIDQ8NI38 313 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 VRK1Q99986 396 aaPredicted RBP16.36■□□□□ 0.21
CCDC43-205ENST00000592333 TMEM43Q9BTV4 400 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 REPIN1Q9BWE0 567 aaKnown RBP16.36■□□□□ 0.21
CCDC43-205ENST00000592333 ASPNQ9BXN1 380 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 RABEP2Q9H5N1 569 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 B3GAT2Q9NPZ5 323 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 CCDC167Q9P0B6 97 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 VAPAQ9P0L0 249 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 CUBNO60494 3623 aa16.36■□□□□ 0.21
CCDC43-205ENST00000592333 MS4A18H0YCH9 400 aa16.35■□□□□ 0.21
CCDC43-205ENST00000592333 LY6HO94772 140 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms