RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 HNRNPCL2B2RXH8 293 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 HNRNPCL3B7ZW38 293 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 C5orf58C9J3I9 102 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 HNRNPCL1O60812 293 aaKnown RBP9.07□□□□□ -0.96
VPS4B-207ENST00000591519 KRT34O76011 436 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 GKN3PP0CG01 181 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 FAM157CP0CG43 387 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 HNRNPCL4P0DMR1 293 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LSP1P33241 339 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 THBS2P35442 1172 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 CRISP3P54108 245 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 MTPNP58546 118 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 COPZ1P61923 177 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 SELPLGQ14242 412 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LARS2Q15031 903 aaKnown RBP9.07□□□□□ -0.96
VPS4B-207ENST00000591519 OR7A5Q15622 319 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LIN52Q52LA3 116 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LRIF1Q5T3J3 769 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 GCNT6Q5T4J0 391 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 C9orf135Q5VTT2 229 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 METTL21CQ5VZV1 264 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 C8orf86Q6ZUL3 223 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 SPATA21Q7Z572 469 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 CPLX4Q7Z7G2 160 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 SNX32Q86XE0 403 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 VRK2Q86Y07 508 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 EPHX4Q8IUS5 362 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF525Q8N782 197 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 POU5F2Q8N7G0 328 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 FAM169BQ8N8A8 192 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 NFKBIDQ8NI38 313 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 MAGEE2Q8TD90 523 aaPredicted RBP9.07□□□□□ -0.96
VPS4B-207ENST00000591519 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 BCL2L2Q92843 193 aaPredicted RBP9.07□□□□□ -0.96
VPS4B-207ENST00000591519 SLC35B4Q969S0 331 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 SPATA9Q9BWV2 254 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 LINC00470Q9BZP3 86 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 BCL2L10Q9HD36 194 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 CRNNQ9UBG3 495 aaPredicted RBP9.07□□□□□ -0.96
VPS4B-207ENST00000591519 MOKQ9UQ07 419 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 CAPN7Q9Y6W3 813 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 STAB1Q9NY15 2570 aa9.07□□□□□ -0.96
VPS4B-207ENST00000591519 CUBNO60494 3623 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ARPC4-TTLL3A0A0A6YYG9 625 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 EVPLLA8MZ36 301 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 FTCDNL1E5RQL4 147 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ATP6V1G2-DDX39BF2Z307 99 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 RPL36A-HNRNPH2H7BZ11 118 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 M0R082 166 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 NDUFS8O00217 210 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 FBP2O00757 339 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 MRASO14807 208 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 FZD7O75084 574 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 DRD4P21917 467 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 USF1P22415 310 aaPredicted RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 BNIP2Q12982 314 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 TBRG1Q3YBR2 411 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 HIKESHIQ53FT3 197 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 RUNDC3AQ59EK9 446 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 C1orf140Q5VVS0 124 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 PRAMEF8Q5VWM4 474 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 PRAMEF7Q5VXH5 474 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 CYB5R2Q6BCY4 276 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 REP15Q6BDI9 236 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ANKRD16Q6P6B7 361 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 KLHL24Q6TFL4 600 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 DLEU7Q6UYE1 221 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF836Q6ZNA1 936 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 GPAT4Q86UL3 456 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 OR1K1Q8NGR3 316 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 MFSD8Q8NHS3 518 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF417Q8TAU3 575 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 HTRA1Q92743 480 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 C3orf49Q96BT1 292 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF587Q96SQ5 575 aaPredicted RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 CGREF1Q99674 301 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 CPPED1Q9BRF8 314 aaPredicted RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 KATNB1Q9BVA0 655 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 TAPBPLQ9BX59 468 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 NSRP1Q9H0G5 558 aaKnown RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ARMC7Q9H6L4 198 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 CACYBPQ9HB71 228 aaKnown RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 MOV10Q9HCE1 1003 aaKnown RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 RASD1Q9Y272 281 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF443Q9Y2A4 671 aaPredicted RBP9.06□□□□□ -0.96
VPS4B-207ENST00000591519 IFT52Q9Y366 437 aa9.06□□□□□ -0.96
VPS4B-207ENST00000591519 TRBV5-3A0A0A0MS03 114 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 LOC102725191A0A1B0GVB3 256 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 GMNCA6NCL1 334 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 RNF212BA8MTL3 300 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 FRS3O43559 492 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 PDE5AO76074 875 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 ZNF432O94892 652 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 IGLV1-44P01699 117 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 IGHV4-31P0DP07 118 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 PRG2P13727 222 aa9.05□□□□□ -0.96
VPS4B-207ENST00000591519 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
VPS4B-207ENST00000591519 PPIBP23284 216 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms