RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 LURAP1Q96LR2 239 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 NRIP2Q9BQI9 281 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 P2RX2Q9UBL9 471 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 SCN2AQ99250 2005 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ASGR2P07307 311 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 NT5EP21589 574 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 PSMA3P25788 255 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TEAD1P28347 426 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 CASRP41180 1078 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 BEND4Q6ZU67 534 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 DPPA2Q7Z7J5 298 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 ASPGQ86U10 573 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TMIEQ8NEW7 156 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 OR1J4Q8NGS1 313 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 KISS1RQ969F8 398 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TOLLIPQ9H0E2 274 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 TRPV4Q9HBA0 871 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 KRCC1Q9NPI7 259 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-228ENST00000590347 SLC7A7Q9UM01 511 aa13.93□□□□□ -0.18
CIRBP-228ENST00000590347 FAM86C2PA6NEL3 165 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 FCMRO60667 390 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 RBBP9O75884 186 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SERPINA5P05154 406 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SNRPCP09234 159 aaKnown RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 GKN3PP0CG01 181 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 C6P13671 934 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SRMP19623 302 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PRKAR1BP31321 381 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 POU3F4P49335 361 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 RGS8P57771 180 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 IL10RAQ13651 578 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PDE7AQ13946 482 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 CD300LDQ6UXZ3 194 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 TMPRSS12Q86WS5 348 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 KCNRGQ8N5I3 272 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 OR5K2Q8NHB8 316 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 ZNF480Q8WV37 535 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 ROBO4Q8WZ75 1007 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 JSRP1Q96MG2 331 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 RHOFQ9HBH0 211 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 DMRT1Q9Y5R6 373 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SCN8AQ9UQD0 1980 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SPEGQ15772 3267 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 ATP1B2P14415 290 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PPP2R1BP30154 601 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 GJA4P35212 333 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 NDUFA6P56556 154 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 C21orf58P58505 322 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 HTRA4P83105 476 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 FUT5Q11128 374 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 GAMTQ14353 236 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SURF2Q15527 256 aaPredicted RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PRAMEF17Q5VTA0 474 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PWWP2BQ6NUJ5 590 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 BHLHE23Q8NDY6 225 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 OR13C2Q8NGS9 318 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 ST7LQ8TDW4 575 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SECTM1Q8WVN6 248 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PMM1Q92871 262 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PELI1Q96FA3 418 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 TMEM41AQ96HV5 264 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 HSPA12BQ96MM6 686 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 NRSN2Q9GZP1 204 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 SYNDIG1Q9H7V2 258 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 FN3KRPQ9HA64 309 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 BRF2Q9HAW0 419 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 PRR13Q9NZ81 148 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 USP36Q9P275 1121 aaKnown RBP13.92□□□□□ -0.18
CIRBP-228ENST00000590347 WASF3Q9UPY6 502 aa13.92□□□□□ -0.18
CIRBP-228ENST00000590347 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 TRAV18A0A075B6X5 111 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 A0A1W2PPE2 198 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 J3QRE1 110 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 SBK2P0C263 348 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 OR4E1P0C645 316 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 DPP4P27487 766 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 CTNNB1P35222 781 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 ACTR1BP42025 376 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 DMKNQ6E0U4 476 aaPredicted RBP13.91□□□□□ -0.18
CIRBP-228ENST00000590347 C3orf33Q6P1S2 294 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.91□□□□□ -0.18
CIRBP-228ENST00000590347 GLB1L2Q8IW92 636 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 SP7Q8TDD2 431 aaPredicted RBP13.91□□□□□ -0.18
CIRBP-228ENST00000590347 APMAPQ9HDC9 416 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 TREM2Q9NZC2 230 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 SLC23A2Q9UGH3 650 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 NAP1L6A6NFF2 107 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 NRG3P56975 720 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 FXYD6P3P58550 94 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 PPP2CBP62714 309 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 PPP2CAP67775 309 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 AIMP2Q13155 320 aaKnown RBP13.91□□□□□ -0.18
CIRBP-228ENST00000590347 GXYLT1Q4G148 440 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 GFI1BQ5VTD9 330 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 OLFML2AQ68BL7 652 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 OR10D4PQ8NGN7 298 aa13.91□□□□□ -0.18
CIRBP-228ENST00000590347 MCHR1Q99705 422 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms